RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 NANOGQ9H9S0 305 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 C8orf4Q9NR00 106 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 CLN6Q9NWW5 311 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 C1orf109Q9NX04 203 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 SEC16AO15027 2179 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 CABIN1Q9Y6J0 2220 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 LCHNA4D1U4 455 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 SGTAO43765 313 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 EFCAB14O75071 495 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 UGT2B11O75310 529 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 CTSOP43234 321 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 NKX2-5P52952 324 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 ILF2Q12905 390 aaKnown RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 HSPB3Q12988 150 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 UAP1L1Q3KQV9 507 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 GPAT3Q53EU6 434 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 OR4F3Q6IEY1 312 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 SULT1C3Q6IMI6 304 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 FAM180BQ6P0A1 224 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 SLC39A5Q6ZMH5 540 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 PIWIL3Q7Z3Z3 882 aaKnown RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 PACRGLQ8N7B6 248 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 GAB3Q8WWW8 586 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 DCSTAMPQ9H295 470 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 MALT1Q9UDY8 824 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 ENTPD4Q9Y227 616 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 FAM234BA2RU67 622 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 OR1F1O43749 312 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 PAK4O96013 591 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 RPN2P04844 631 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 HPGDP15428 266 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 BUD31P41223 144 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 FAM46CQ5VWP2 391 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 TPRG1Q6ZUI0 275 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 KIAA1191Q96A73 305 aa13.17□□□□□ -0.3
TMEM248-201ENST00000341567 CCM2LQ9NUG4 571 aaPredicted RBP13.17□□□□□ -0.3
TMEM248-201ENST00000341567 C7orf72A4D263 438 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 NME4O00746 187 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 WNT9AO14904 365 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 MUSKO15146 869 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 RASGRP1O95267 797 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 AMD1P17707 334 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ATF6P18850 670 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 PRDX3P30048 256 aaKnown RBP13.16□□□□□ -0.3
TMEM248-201ENST00000341567 LEPRP48357 1165 aaKnown RBP13.16□□□□□ -0.3
TMEM248-201ENST00000341567 PTPN5P54829 565 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 CDH12P55289 794 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SH3BP2P78314 561 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 STEAP4Q687X5 459 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 GOLGA7Q7Z5G4 137 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ADGRG2Q8IZP9 1017 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SLC15A4Q8N697 577 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 WDR48Q8TAF3 677 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 PIH1D2Q8WWB5 315 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 FBXL21Q9UKT6 434 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SLC9A8Q9Y2E8 581 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 MAST2Q6P0Q8 1798 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 A0A1B0GTW7 788 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 TTC34A8MYJ7 566 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 CDH1P12830 882 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SLC6A2P23975 617 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 FOXA1P55317 472 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 NFATC2Q13469 925 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 UNC50Q53HI1 259 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ZNF773Q6PK81 442 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ISCA2Q86U28 154 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SNX29P2Q8IUI4 249 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 MZB1Q8WU39 189 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 PTERQ96BW5 349 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 CLSTN3Q9BQT9 956 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ZDHHC3Q9NYG2 299 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ITM2BQ9Y287 266 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 LAMB1P07942 1786 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 CD1DP15813 335 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 EEFSECP57772 596 aaKnown RBP13.16□□□□□ -0.3
TMEM248-201ENST00000341567 RING1Q06587 406 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 QPRTQ15274 297 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ATP13A5Q4VNC0 1218 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 TNFAIP8L2Q6P589 184 aaPredicted RBP13.16□□□□□ -0.3
TMEM248-201ENST00000341567 PLET1Q6UQ28 207 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 IRF7Q92985 503 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 NAA50Q9GZZ1 169 aaKnown RBP13.16□□□□□ -0.3
TMEM248-201ENST00000341567 OR51B5Q9H339 312 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 MUC13Q9H3R2 512 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SERHL2Q9H4I8 314 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 ZDHHC7Q9NXF8 308 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 PTBP2Q9UKA9 531 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms