RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 DNAAF3Q8N9W5 541 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 MDS2Q8NDY4 140 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 OR2L8Q8NGY9 312 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 CFAP61Q8NHU2 1237 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 CA5BP1Q8WTZ4 195 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 PHF10Q8WUB8 498 aaKnown RBP15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 CDKN2AIPNLQ96HQ2 116 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 NPAS2Q99743 824 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 TRIM51Q9BSJ1 452 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 YIPF2Q9BWQ6 316 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 CXXC4Q9H2H0 198 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 INTS7Q9NVH2 962 aaKnown RBP15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 NLE1Q9NVX2 485 aaPredicted RBP15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 ANKRD10Q9NXR5 420 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 TRPC4Q9UBN4 977 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 CAPN11Q9UMQ6 739 aa15.53■□□□□ 0.08
NECTIN1-202ENST00000340882 IGHV3-20A0A0C4DH32 117 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 FAM221AA4D161 298 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 ASPDHA6ND91 283 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 A8MUI8 341 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 OR1I1O60431 355 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 MAN1A2O60476 641 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 SRPX2O60687 465 aaPredicted RBP15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 ZRANB2O95218 330 aaKnown RBP eCLIP15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 FTH1P02794 183 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 TMEM253P0C7T8 217 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 TPH1P17752 444 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 TUBA3CQ13748 450 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 SYT16Q17RD7 645 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 SYTL3Q4VX76 610 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 ODF2Q5BJF6 829 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 TUBA3EQ6PEY2 450 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 TMEM205Q6UW68 189 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 TMTC1Q8IUR5 882 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 LKAAEAR1Q8TD35 194 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 ZUFSPQ96AP4 578 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 SLC22A18Q96BI1 424 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 FRMD6Q96NE9 622 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 C19orf43Q9BQ61 176 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 DDX56Q9NY93 547 aaKnown RBP15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 ASB1Q9Y576 335 aa15.52■□□□□ 0.08
NECTIN1-202ENST00000340882 HRNRQ86YZ3 2850 aaPredicted RBP15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 hCG_1818297A0A087WSY0 165 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 NKX2-6A6NCS4 301 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 TARM1B6A8C7 271 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 E9PLN8 166 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 TTI1O43156 1089 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 ASNA1O43681 348 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 HEXBP07686 556 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 DRD2P14416 443 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 ABOP16442 354 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 CCR7P32248 378 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 SNRPNP63162 240 aaKnown RBP15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 TFF3Q07654 80 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 SLC18A3Q16572 532 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 ASTE1Q2TB18 679 aaPredicted RBP15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 PRTGQ2VWP7 1150 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 RNFT1Q5M7Z0 435 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 SPINK14Q6IE38 97 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 FBXO42Q6P3S6 717 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 CCDC50Q8IVM0 306 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 SLC22A15Q8IZD6 547 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 MARVELD2Q8N4S9 558 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 SCMH1Q96GD3 660 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 MIPEPQ99797 713 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 TBL1YQ9BQ87 522 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 VKORC1Q9BQB6 163 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 UCK2Q9BZX2 261 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 PPT2Q9UMR5 302 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 HRH3Q9Y5N1 445 aa15.51■□□□□ 0.07
NECTIN1-202ENST00000340882 SCN3AQ9NY46 2000 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 HACD1B0YJ81 288 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 RASGRF2O14827 1237 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 KDM1AO60341 852 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 FAM155BO75949 473 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 SEC24DO94855 1032 aaPredicted RBP15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 GYPCP04921 128 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 MYBL2P10244 700 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 COMTP21964 271 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 CD96P40200 585 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 FOXD4Q12950 439 aaPredicted RBP15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 DSG2Q14126 1118 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 FASTKQ14296 549 aaKnown RBP15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 MUM1Q2TAK8 710 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 CCSMST1Q4G0I0 132 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 DNAJC21Q5F1R6 531 aaKnown RBP15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 ACER2Q5QJU3 275 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 ANKRD20A2Q5SQ80 823 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 ANKRD20A1Q5TYW2 823 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 ANKRD20A3Q5VUR7 823 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 PACS1Q6VY07 963 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 RNF44Q7L0R7 432 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 TMEM200AQ86VY9 491 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 ZC3H7AQ8IWR0 971 aaKnown RBP15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 CABS1Q96KC9 395 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 FOXC2Q99958 501 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 BPIFA3Q9BQP9 254 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 ARNT2Q9HBZ2 717 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 DLL4Q9NR61 685 aa15.5■□□□□ 0.07
NECTIN1-202ENST00000340882 CCM2LQ9NUG4 571 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms