RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 WFS1O76024 890 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 CLDN9O95484 217 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 CAPN1P07384 714 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 TROVE2P10155 538 aaKnown RBP eCLIP12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 GNAZP19086 355 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 CD22P20273 847 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 VARSP26640 1264 aaKnown RBP12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 AQP5P55064 265 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 PDCD2Q16342 344 aaPredicted RBP12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 XKR6Q5GH73 641 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 TCHHL1Q5QJ38 904 aaPredicted RBP12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 CATSPEREQ5SY80 951 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 SLCO4C1Q6ZQN7 724 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 SPATA21Q7Z572 469 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 PIGWQ7Z7B1 504 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 MYLK4Q86YV6 388 aaPredicted RBP12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 FAM20CQ8IXL6 584 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 L3MBTL4Q8NA19 623 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 OR2A1Q8NGT9 310 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 OR10G6Q8NH81 332 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 SLC5A11Q8WWX8 675 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 HAUS8Q9BT25 410 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 TWSG1Q9GZX9 223 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 RASSF4Q9H2L5 321 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 KLHL14Q9P2G3 628 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 DNAJC15Q9Y5T4 150 aa12.88□□□□□ -0.35
GTF2F2-201ENST00000340473 KCNE1BA0A087WTH5 132 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 OR6C74A6NCV1 312 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 NDUFAB1O14561 156 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 CLGNO14967 610 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 CRCPO75575 148 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 RETP07949 1114 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 CDH1P12830 882 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 HGFP14210 728 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 POLR2CP19387 275 aaPredicted RBP12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 IRF8Q02556 426 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 PCDH1Q08174 1060 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 DOC2AQ14183 400 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 TMPRSS11BQ86T26 416 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 OR4C6Q8NH72 309 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 PRRX2Q99811 253 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 PCBD2Q9H0N5 130 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 STN1Q9H668 368 aaKnown RBP12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 UCK1Q9HA47 277 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 CUEDC1Q9NWM3 386 aaPredicted RBP12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 TRPS1Q9UHF7 1281 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 PCDHB11Q9Y5F2 797 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 RNF215Q9Y6U7 377 aa12.87□□□□□ -0.35
GTF2F2-201ENST00000340473 A0A0G2JND7 137 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 FFAR3O14843 346 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 HDAC3O15379 428 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 GPR42O15529 346 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 SKAP2O75563 359 aaPredicted RBP12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ENO1P06733 434 aaKnown RBP12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 UROSP10746 265 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ALOX15P16050 662 aaPredicted RBP12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 BIRC2Q13490 618 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 CPSF6Q16630 551 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■■■ 28.7
GTF2F2-201ENST00000340473 GGTA1PQ4G0N0 100 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ICE2Q659A1 982 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ZCCHC8Q6NZY4 707 aaKnown RBP12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 FLVCR1-AS1Q8TAF5 88 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 METTL6Q8TCB7 284 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 C10orf82Q8WW14 230 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 PPP1R36Q96LQ0 422 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 PTGDR2Q9Y5Y4 395 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 PIPSLA2A3N6 862 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 FAM221BA6H8Z2 402 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ISM1B1AKI9 464 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 SIGLEC6O43699 453 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 PCDHGA12O60330 932 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 UGDHO60701 494 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 CASP2P42575 452 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 BTKQ06187 659 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 PRDX1Q06830 199 aaKnown RBP12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 E2F2Q14209 437 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ATG9BQ674R7 924 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 NXPE4Q6UWF7 544 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 C17orf64Q86WR6 236 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 OR2L3Q8NG85 312 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 RSC1A1Q92681 617 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 ATOH1Q92858 354 aaPredicted RBP12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 FAR2Q96K12 515 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 SLC38A3Q99624 504 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 EBF4Q9BQW3 602 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 SPNS1Q9H2V7 528 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 FAM86C1Q9NVL1 165 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 VTI1BQ9UEU0 232 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 BTRCQ9Y297 605 aa12.86□□□□□ -0.35
GTF2F2-201ENST00000340473 IGKV1-8A0A0C4DH67 115 aa12.85□□□□□ -0.35
GTF2F2-201ENST00000340473 LY6G6EA0A0G2JKS1 128 aa12.85□□□□□ -0.35
GTF2F2-201ENST00000340473 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms