RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TRABD2AQ86V40 505 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 CLEC1AQ8NC01 280 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 ZNF689Q96CS4 500 aaPredicted RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 DTD2Q96FN9 168 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 NECTIN3Q9NQS3 549 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 LYARQ9NX58 379 aaKnown RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 XKRYO14609 159 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 HOXC11O43248 304 aaPredicted RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 TLX3O43711 291 aaPredicted RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 NUDT17P0C025 328 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 TPMTP51580 245 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 CYP1B1Q16678 543 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 DECR1Q16698 335 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 TMEM139Q8IV31 216 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 AADATQ8N5Z0 425 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 Q9N2J8 555 aa12.46□□□□□ -0.41
LIN54-201ENST00000340417 CNOT6Q9ULM6 557 aaKnown RBP12.46□□□□□ -0.41
LIN54-201ENST00000340417 SCDO00767 359 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 TCEA3O75764 348 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 IL6P05231 212 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 GIMD1P0DJR0 217 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 MEF2AQ02078 507 aaPredicted RBP12.46□□□□□ -0.42
LIN54-201ENST00000340417 RAB6CQ53S08 254 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 DCAF12Q5T6F0 453 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 ADGRD1Q6QNK2 874 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 EIF3MQ7L2H7 374 aaKnown RBP12.46□□□□□ -0.42
LIN54-201ENST00000340417 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.46□□□□□ -0.42
LIN54-201ENST00000340417 AGBL5Q8NDL9 886 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 RAB6CQ9H0N0 254 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 AHSGP02765 367 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 EFNA1P20827 205 aaPredicted RBP12.46□□□□□ -0.42
LIN54-201ENST00000340417 FEN1P39748 380 aaKnown RBP12.46□□□□□ -0.42
LIN54-201ENST00000340417 POLR2JP52435 117 aaKnown RBP12.46□□□□□ -0.42
LIN54-201ENST00000340417 FOXC1Q12948 553 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 ACSBG2Q5FVE4 666 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 RBM20Q5T481 1227 aaKnown RBP12.46□□□□□ -0.42
LIN54-201ENST00000340417 USP30Q70CQ3 517 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 HSD11B1LQ7Z5J1 315 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 DCAKDQ8WVC6 231 aa12.46□□□□□ -0.42
LIN54-201ENST00000340417 FAM86C2PA6NEL3 165 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 SUV39H1O43463 412 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 TUBB3Q13509 450 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 ZNF267Q14586 743 aaPredicted RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 ABHD17BQ5VST6 288 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DHDDSQ86SQ9 333 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 ARMC8Q8IUR7 673 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 THAP3Q8WTV1 239 aaPredicted RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 OSBPL10Q9BXB5 764 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 EPB41L4BQ9H329 900 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DEAF1O75398 565 aaPredicted RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 HMGA1P17096 107 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 ID2Q02363 134 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 NUP54Q7Z3B4 507 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 ACVR1CQ8NER5 493 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 SNIP1Q8TAD8 396 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 PTGES2Q9H7Z7 377 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 KCND1Q9NSA2 647 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DUXAA6NLW8 204 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 OR10H3O60404 316 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 LDLRP01130 860 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 NR2F6P10588 404 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 IL7RP16871 459 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 AQP1P29972 269 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 GDF5P43026 501 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 IRF9Q00978 393 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 NADSYN1Q6IA69 706 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 EPS8L2Q9H6S3 715 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 TAAR2Q9P1P5 351 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DHRS7Q9Y394 339 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 TNS1Q9HBL0 1735 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 CDC40O60508 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
LIN54-201ENST00000340417 GRK6P43250 576 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 SPIBQ01892 262 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 HERC3Q15034 1050 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 NCF4Q15080 339 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 TCHHL1Q5QJ38 904 aaPredicted RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 OR10Q1Q8NGQ4 319 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DERL2Q9GZP9 239 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 SPATA7Q9P0W8 599 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 RAB21Q9UL25 225 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 A0A1W2PRB8 838 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 NARSO43776 548 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 RPLP0P05388 317 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 RPS14P62263 151 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 SLC10A2Q12908 348 aaPredicted RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 PLD3Q8IV08 490 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 C1orf52Q8N6N3 182 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 TM9SF4Q92544 642 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 DAZLQ92904 295 aaKnown RBP12.45□□□□□ -0.42
LIN54-201ENST00000340417 LGR4Q9BXB1 951 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 MAU2Q9Y6X3 613 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms