RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TIE1P35590 1138 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CSNK1DP48730 415 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DGUOKQ16854 277 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HACD2Q6Y1H2 254 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PARP8Q8N3A8 854 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ZCCHC7Q8N3Z6 543 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FLCNQ8NFG4 579 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CWH43Q9H720 699 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HIDE1A8MVS5 230 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ARNTP27540 789 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 IFI44LQ53G44 452 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TMIGD1Q6UXZ0 262 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 GALNT7Q86SF2 657 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HERVK_113Q902F9 699 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FATE1Q969F0 183 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TMBIM1Q969X1 311 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PDLIM5Q96HC4 596 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CLN6Q9NWW5 311 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FAM120CQ9NX05 1096 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SOHLH2Q9NX45 425 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 NDOR1Q9UHB4 597 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TAC3Q9UHF0 121 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 COLEC10Q9Y6Z7 277 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RREB1Q92766 1687 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 NOBOXO60393 691 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 IFNW1P05000 195 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 LRRC32Q14392 662 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TYSND1Q2T9J0 566 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 C18orf21Q32NC0 220 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RFTN2Q52LD8 501 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CCDC92Q53HC0 331 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 KBTBD6Q86V97 674 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TMEM126BQ8IUX1 230 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PIK3C3Q8NEB9 887 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 OR52J3Q8NH60 311 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 GIPC3Q8TF64 312 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RIT1Q92963 219 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 EXD2Q9NVH0 621 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 LHX3Q9UBR4 397 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 GBAP04062 536 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 JUNP05412 331 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CTSOP43234 321 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC7A9P82251 487 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 MS4A2Q01362 244 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DAG1Q14118 895 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 LARP4Q71RC2 724 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HTRA2O43464 458 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PAICSP22234 425 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DEPDC1Q5TB30 811 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 NEK5Q6P3R8 708 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ZBTB46Q86UZ6 589 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC5A11Q8WWX8 675 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 MAELQ96JY0 434 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 MIR1-1HGQ9H1L0 117 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 OAS3Q9Y6K5 1087 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 GADD45GO95257 159 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 OPN1SWP03999 348 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ZDHHC11BP0C7U3 371 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RPL10P27635 214 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 NCF4Q15080 339 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC14A2Q15849 920 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HKDC1Q2TB90 917 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SPATS1Q496A3 300 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DGKKQ5KSL6 1271 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 MRPL43Q8N983 215 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SMPDL3AQ92484 453 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SMARCD2Q92925 531 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ZFYVE19Q96K21 471 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 KCNH6Q9H252 994 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DPEP2Q9H4A9 486 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 GPR39O43194 453 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC35G6P0C7Q6 338 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TRIM71Q2Q1W2 868 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PAGE3Q5JUK9 113 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SATL1Q86VE3 508 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PARGQ86W56 976 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 OR9A1PQ8NGU1 263 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 C3orf30Q96M34 536 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ZDHHC4Q9NPG8 344 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TTC3P53804 2025 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CCDC85CA6NKD9 419 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HEPACAM2A8MVW5 462 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TSPAN6O43657 245 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SERPINB1P30740 379 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 INHBCP55103 352 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 C21orf59P57076 290 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RUNX3Q13761 415 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 VMACQ2NL98 169 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 KANK2Q63ZY3 851 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 AURKBQ96GD4 344 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TEFMQ96QE5 360 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HMG20AQ9NP66 347 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 NDRG2Q9UN36 371 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SHANK3Q9BYB0 1731 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TRIP12Q14669 1992 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 EIF3FO00303 357 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ADAMDEC1O15204 470 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC16A5O15375 505 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CCNYL3P0C7X3 344 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms