RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NFS1Q9Y697 457 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 MAU2Q9Y6X3 613 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 NUP210LQ5VU65 1888 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 PCSK5Q92824 1860 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CTAGE9A4FU28 777 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 FITM1A5D6W6 292 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ANKUB1A6NFN9 424 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ZNF839A8K0R7 811 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 GOLGA8KD6RF30 607 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 GOLGA8TH3BQL2 631 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 MASP2O00187 686 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 PRPF4O43172 522 aaKnown RBP eCLIP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 PRICKLE3O43900 615 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CTSVO60911 334 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 NIPSNAP2O75323 286 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 VPS26AO75436 327 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CBX6O95503 412 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 PKMP14618 531 aaKnown RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 TPSB2P20231 275 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 BDKRB1P46663 353 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ADARP55265 1226 aaKnown RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 FOXL2P58012 376 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 THOC5Q13769 683 aaKnown RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 SIX1Q15475 284 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 TPSAB1Q15661 275 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 MUM1Q2TAK8 710 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 TTLL9Q3SXZ7 439 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CCSMST1Q4G0I0 132 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ARMC3Q5W041 872 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 KIRREL2Q6UWL6 708 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CES3Q6UWW8 571 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 Q6ZS92 163 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 OR2A1Q8NGT9 310 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 OR9A1PQ8NGU1 263 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 DNAJB14Q8TBM8 379 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 RERGQ96A58 199 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 FAM136AQ96C01 138 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 MIEF2Q96C03 454 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 MFSD3Q96ES6 412 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 THOC3Q96J01 351 aaKnown RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CABS1Q96KC9 395 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 DPH7Q9BTV6 452 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CRB3Q9BUF7 120 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ACAT2Q9BWD1 397 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 LHPPQ9H008 270 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 CCDC68Q9H2F9 335 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 EPS8L2Q9H6S3 715 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 MRPS30Q9NP92 439 aaKnown RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 SPATA7Q9P0W8 599 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ZNF282Q9UDV7 671 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 SOX13Q9UN79 622 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 RUVBL2Q9Y230 463 aaKnown RBP10.19□□□□□ -0.78
CAPN3-202ENST00000337571 HS3ST3B1Q9Y662 390 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 ESPL1Q14674 2120 aa10.19□□□□□ -0.78
CAPN3-202ENST00000337571 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 NAV2Q8IVL1 2488 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 SDR42E2A6NKP2 422 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 SOCS6O14544 535 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 PHF2O75151 1096 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 CCNDBP1O95273 360 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 MATN4O95460 622 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 CATP04040 527 aaKnown RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 UQCRHP07919 91 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 OGNP20774 298 aaKnown RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 FBLP22087 321 aaKnown RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 CXCR2P25025 360 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 PSMB5P28074 263 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ATP5DP30049 168 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 CXCR5P32302 372 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 GCGRP47871 477 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 VPS41P49754 854 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 GPS1Q13098 491 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ARHGAP19Q14CB8 494 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 TRIP13Q15645 432 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 HIF1AQ16665 826 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 TYSND1Q2T9J0 566 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 KLHL38Q2WGJ6 581 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 CTSL3PQ5NE16 218 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 FRMPD2BQ6IN97 320 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 NEPROQ6NW34 567 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 FBXO42Q6P3S6 717 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ZNF662Q6ZS27 426 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 SMPDL3AQ92484 453 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 LPGAT1Q92604 370 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 C5orf34Q96MH7 638 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ZNF285Q96NJ3 590 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 BIRC8Q96P09 236 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 SPSB2Q99619 263 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ZFYVE21Q9BQ24 234 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 WDR77Q9BQA1 342 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ZBTB20Q9HC78 741 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 ENAMQ9NRM1 1142 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 INTS10Q9NVR2 710 aaKnown RBP10.18□□□□□ -0.78
CAPN3-202ENST00000337571 CTSFQ9UBX1 484 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 SLC5A6Q9Y289 635 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 KLK4Q9Y5K2 254 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 SHANK1Q9Y566 2161 aa10.18□□□□□ -0.78
CAPN3-202ENST00000337571 LOC105369274A0A096LPK9 316 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms