RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KCNE1BA0A087WTH5 132 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 A0A0G2JN53 185 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 CA3P07451 260 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 ADH5P11766 374 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 CYP2A7P20853 494 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 HNF4AP41235 474 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 CSNK1DP48730 415 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 TPD52P55327 224 aaPredicted RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 FOXM1Q08050 763 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 GPR107Q5VW38 600 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 ZNF852Q6ZMS4 543 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 DPP10Q8N608 796 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 RHNO1Q9BSD3 238 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 RBM38Q9H0Z9 239 aaKnown RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 PRDM8Q9NQV8 689 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 C5AR2Q9P296 337 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 STOX2Q9P2F5 926 aaPredicted RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 TRPS1Q9UHF7 1281 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 FBXO10Q9UK96 956 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 CEPT1Q9Y6K0 416 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 LTBP2Q14767 1821 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 LINC01553A4QN01 128 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 PTGES3LE9PB15 166 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 RFXAPO00287 272 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 FPGTO14772 594 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SPINT1O43278 529 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 CREG1O75629 220 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 RECQL5O94762 991 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 ALBP02768 609 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 CDH2P19022 906 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 FSHRP23945 695 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 IMPA1P29218 277 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 GJA8P48165 433 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 RPS13P62277 151 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 POLR2LP62875 67 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 PMS2P3Q13401 168 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 MEP1AQ16819 746 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 UGT8Q16880 541 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SLC36A3Q495N2 470 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 FAM98BQ52LJ0 330 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 TMTC4Q5T4D3 741 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 HENMT1Q5T8I9 393 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 LYPLAL1Q5VWZ2 237 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 GPR180Q86V85 440 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 TMEM126BQ8IUX1 230 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 ASZ1Q8WWH4 475 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SMG7Q92540 1137 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 GLYATL1Q969I3 302 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 ARRDC3Q96B67 414 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 DGCR14Q96DF8 476 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 ZNF641Q96N77 438 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 POLR1BQ9H9Y6 1135 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 CLK4Q9HAZ1 481 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 RAPGEFL1Q9UHV5 662 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 MAGEL2Q9UJ55 1249 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SNX6Q9UNH7 406 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 NINQ8N4C6 2090 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SDK1Q7Z5N4 2213 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 BRWD1Q9NSI6 2320 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 IGLV3-16A0A075B6K0 115 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 CFAP99D6REC4 459 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 RTCAO00442 366 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 AP1G1O43747 822 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 CDH1P12830 882 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 AMD1P17707 334 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 ENGP17813 658 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 FUT4P22083 530 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SLC6A12P48065 614 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 ARSFP54793 590 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 ROR2Q01974 943 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 SIM2Q14190 667 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 AASDHQ4L235 1098 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 ZNF805Q5CZA5 627 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 TMEM240Q5SV17 173 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 TMEM26Q6ZUK4 368 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 NECAB2Q7Z6G3 386 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 HMGN2P46Q86SG4 172 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 PLD3Q8IV08 490 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 RIMKLAQ8IXN7 391 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 TBC1D21Q8IYX1 336 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 BPIFB1Q8TDL5 484 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 BTN2A2Q8WVV5 523 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 CIDECQ96AQ7 238 aaPredicted RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 DUS3LQ96G46 650 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 SEZ6LQ9BYH1 1024 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 CPEB1Q9BZB8 566 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 ING2Q9H160 280 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 SLC6A17Q9H1V8 727 aa8.57□□□□□ -1.04
SNCA-201ENST00000336904 KAT8Q9H7Z6 458 aaKnown RBP8.57□□□□□ -1.04
SNCA-201ENST00000336904 HEPACAM2A8MVW5 462 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 G3V2T6 193 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 H3BM21 787 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 NUAK1O60285 661 aa8.56□□□□□ -1.04
SNCA-201ENST00000336904 PIM1P11309 404 aaPredicted RBP8.56□□□□□ -1.04
SNCA-201ENST00000336904 PSMB5P28074 263 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms