RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 GPRC5BQ9NZH0 403 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 RAP2CQ9Y3L5 183 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 KCNE2Q9Y6J6 123 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 DMXL1Q9Y485 3027 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 OR5K3A6NET4 321 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 TMEM233B4DJY2 109 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 KATNA1O75449 491 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 TYRP1P17643 537 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 CCNG1P51959 295 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 FOXA1P55317 472 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 PCDH1Q08174 1060 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 NR0B2Q15466 257 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 TUBB8Q3ZCM7 444 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 GPRIN3Q6ZVF9 776 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 FAM20CQ8IXL6 584 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 OR4F6Q8NGB9 312 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 AGR3Q8TD06 166 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 PCBD2Q9H0N5 130 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 PCDHB11Q9Y5F2 797 aa20.75■□□□□ 0.91
TPM1-204ENST00000334895 PIPSLA2A3N6 862 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 WFS1O76024 890 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 UBXN7O94888 489 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 OR4F21O95013 312 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 ESRRBO95718 433 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 OTCP00480 354 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 CD22P20273 847 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 PKNOX1P55347 436 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 PPP1CAP62136 330 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 PRKAA1Q13131 559 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 SUZ12Q15022 739 aaKnown RBP20.74■□□□□ 0.91
TPM1-204ENST00000334895 CATSPEREQ5SY80 951 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 ICE2Q659A1 982 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 CGB2Q6NT52 195 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 GUSBP11Q6P575 273 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 SLCO4C1Q6ZQN7 724 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 SLC5A11Q8WWX8 675 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 ATP6V1E2Q96A05 226 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 CCDC74AQ96AQ1 378 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 OR2A14Q96R47 310 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 KCNA7Q96RP8 456 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 HAUS8Q9BT25 410 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 ILKAPQ9H0C8 392 aaPredicted RBP20.74■□□□□ 0.91
TPM1-204ENST00000334895 EML4Q9HC35 981 aaKnown RBP20.74■□□□□ 0.91
TPM1-204ENST00000334895 CUEDC1Q9NWM3 386 aaPredicted RBP20.74■□□□□ 0.91
TPM1-204ENST00000334895 HRASLS2Q9NWW9 162 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 ACTR10Q9NZ32 417 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 RNF11Q9Y3C5 154 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 DYRK1BQ9Y463 629 aa20.74■□□□□ 0.91
TPM1-204ENST00000334895 RP1P56715 2156 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 IGKV1-8A0A0C4DH67 115 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 GMNCA6NCL1 334 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 ISM1B1AKI9 464 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 CASC3O15234 703 aaKnown RBP20.73■□□□□ 0.91
TPM1-204ENST00000334895 CD59P13987 128 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 UGT2B7P16662 529 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 GNAZP19086 355 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 EPHA4P54764 986 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 OR1D5P58170 312 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 PRDX1Q06830 199 aaKnown RBP20.73■□□□□ 0.91
TPM1-204ENST00000334895 CHIT1Q13231 466 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 E2F2Q14209 437 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 KIR2DS3Q14952 304 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 SH2D4BQ5SQS7 431 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 OR2L3Q8NG85 312 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 TMEM9BQ9NQ34 198 aa20.73■□□□□ 0.91
TPM1-204ENST00000334895 MARCOQ9UEW3 520 aaPredicted RBP20.73■□□□□ 0.91
TPM1-204ENST00000334895 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.73■□□□□ 0.91
TPM1-204ENST00000334895 KCNE1BA0A087WTH5 132 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 GSAPA4D1B5 854 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 EME2A4GXA9 379 aaPredicted RBP20.72■□□□□ 0.91
TPM1-204ENST00000334895 B4GAT1O43505 415 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 SNUPNO95149 360 aaKnown RBP20.72■□□□□ 0.91
TPM1-204ENST00000334895 PROS1P07225 676 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 EBLN1P0CF75 366 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 CDH1P12830 882 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 DRD4P21917 467 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 VARSP26640 1264 aaKnown RBP20.72■□□□□ 0.91
TPM1-204ENST00000334895 GRK6P43250 576 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 CAPZBP47756 277 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 CBX1P83916 185 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 DOC2AQ14183 400 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 PERM1Q5SV97 790 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 CLEC6AQ6EIG7 209 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 MILR1Q7Z6M3 343 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 TMPRSS11BQ86T26 416 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 C17orf64Q86WR6 236 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 OOSP2Q86WS3 158 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 CRLF3Q8IUI8 442 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 L3MBTL4Q8NA19 623 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 GRAMD1AQ96CP6 724 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 WDR34Q96EX3 536 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 ACTR8Q9H981 624 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 SLC6A20Q9NP91 592 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 KCNK4Q9NYG8 393 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 STK38LQ9Y2H1 464 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 HEATR5BQ9P2D3 2071 aa20.72■□□□□ 0.91
TPM1-204ENST00000334895 COL5A1P20908 1838 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 IGHV1OR21-1A0A087WYE8 117 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 CLGNO14967 610 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 FLRT2O43155 660 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms