RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SORCS1Q8WY21 1168 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 HDAC2Q92769 488 aaKnown RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 THAP11Q96EK4 314 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 DOK1Q99704 481 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 TUBA1CQ9BQE3 449 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 RIOK2Q9BVS4 552 aaKnown RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 PCDH12Q9NPG4 1184 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 THG1LQ9NWX6 298 aaKnown RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 ARHGEF33A8MVX0 844 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 FPGTO14772 594 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 ABCB7O75027 752 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 C1QCP02747 245 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 COX7A2P14406 83 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 CD22P20273 847 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 TEAD2Q15562 447 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 ZNF551Q7Z340 670 aaPredicted RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 RBM23Q86U06 439 aaKnown RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 ADIPOR2Q86V24 386 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 ZDHHC21Q8IVQ6 265 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 NAT16Q8N8M0 369 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 CHDHQ8NE62 594 aaPredicted RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 OR13F1Q8NGS4 319 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 FRS2Q8WU20 508 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 IRF7Q92985 503 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 FBXL8Q96CD0 374 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 NRBF2Q96F24 287 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 SAMD4AQ9UPU9 718 aaKnown RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 CARNS1A5YM72 827 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 E7EQ34 232 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 SGTAO43765 313 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 GSTM1P09488 218 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ACRP10323 421 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 PREPP48147 710 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 GSTM4Q03013 218 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 DUOXA1Q1HG43 343 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ARSIQ5FYB1 569 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 GALNT10Q86SR1 603 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ARL10Q8N8L6 244 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 FOXJ1Q92949 421 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 MAGEB10Q96LZ2 347 aaPredicted RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 HEPHQ9BQS7 1158 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 LINC00597Q9H2U6 94 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 EXD2Q9NVH0 621 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 BLOC1S6Q9UL45 172 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 LOC100130705A0A1B0GUX0 176 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 FADS2P1A8MWK0 482 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 TTC34A8MYJ7 566 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 TSPAN6O43657 245 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 SH3BGRLO75368 114 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 EPN2O95208 641 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 CCNDBP1O95273 360 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 CLTBP09497 229 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 PFKLP17858 780 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 MATN1P21941 496 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 XPAP23025 273 aaPredicted RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 WEE1P30291 646 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ENTPD1P49961 510 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 CD47Q08722 323 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ACSM2AQ08AH3 577 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 GTF2H3Q13889 308 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 CBX2Q14781 532 aaPredicted RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 UGT8Q16880 541 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 DPY19L1Q2PZI1 675 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 CTU2Q2VPK5 515 aaKnown RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 C6orf141Q5SZD1 244 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ACSM2BQ68CK6 577 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ANKRD26P1Q6NSI1 321 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ELMSAN1Q6PJG2 1045 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 ZNF621Q6ZSS3 439 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 MSANTD1Q6ZTZ1 278 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 NEK10Q6ZWH5 1172 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 THOC6Q86W42 341 aaKnown RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 HIPK1Q86Z02 1210 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 RAVER1Q8IY67 606 aaKnown RBP17.17■□□□□ 0.34
LRCH3-201ENST00000334859 BPIFB6Q8NFQ5 453 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 FAM81AQ8TBF8 368 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 TMEM159Q96B96 161 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 AASDHPPTQ9NRN7 309 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 VNN3Q9NY84 501 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 VPS29Q9UBQ0 182 aa17.17■□□□□ 0.34
LRCH3-201ENST00000334859 CLIC1O00299 241 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 FOXD2O60548 495 aaPredicted RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 AP2A2O94973 939 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 CPSF4O95639 269 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 ACPPP15309 386 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 ENGP17813 658 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 IL1RNP18510 177 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 EFNA1P20827 205 aaPredicted RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 MNX1P50219 401 aaPredicted RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 RAD23AP54725 363 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 CSTF3Q12996 717 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 MTAPQ13126 283 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 NAE1Q13564 534 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 SKIV2LQ15477 1246 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 SF1Q15637 639 aaKnown RBP17.16■□□□□ 0.34
LRCH3-201ENST00000334859 ZNF284Q2VY69 593 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 LY6G5CQ5SRR4 150 aa17.16■□□□□ 0.34
LRCH3-201ENST00000334859 LIPJQ5W064 366 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms