RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ACTR1AP61163 376 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 PPP1R3AQ16821 1122 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 GPRC6AQ5T6X5 926 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ZCCHC8Q6NZY4 707 aaKnown RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 PARS2Q7L3T8 475 aaKnown RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ZBTB2Q8N680 514 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ENKURQ8TC29 256 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 MAPK15Q8TD08 544 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TSSK3Q96PN8 268 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 OR52E6Q96RD3 313 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 SLC17A9Q9BYT1 436 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 SLC2A4RGQ9NR83 387 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 KRT84Q9NSB2 600 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 GIN1Q9NXP7 522 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 STOML2Q9UJZ1 356 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 PDE10AQ9Y233 779 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 CENPXA8MT69 81 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 MUSKO15146 869 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TBX1O43435 398 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 VIPP01282 170 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 GPIP06744 558 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ACP5P13686 325 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TOP3AQ13472 1001 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 HSF5Q4G112 596 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 FGD3Q5JSP0 725 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 CRTC1Q6UUV9 634 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 AHSA2Q719I0 299 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ADIPOR2Q86V24 386 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 C12orf40Q86WS4 652 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ZBTB8BQ8NAP8 495 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 FAR1Q8WVX9 515 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ATL1Q8WXF7 558 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 FOXQ1Q9C009 403 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 H0Y858 1186 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TP73O15350 636 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 NARSO43776 548 aaKnown RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 MLYCDO95822 493 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 CHI3L1P36222 383 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 PTPN5P54829 565 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 CHSY3Q70JA7 882 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ADGRG6Q86SQ4 1221 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 MARVELD2Q8N4S9 558 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 PIGKQ92643 395 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 MAGEL2Q9UJ55 1249 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 NUMA1Q14980 2115 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 CYP7B1O75881 506 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 MYBPC3Q14896 1274 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 SMAD2Q15796 467 aaKnown RBP11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TNFAIP8L3Q5GJ75 292 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 RABL3Q5HYI8 236 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 KIAA1958Q8N8K9 716 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 OR10A6Q8NH74 314 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 FOXJ1Q92949 421 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 SLC47A1Q96FL8 570 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 UBAP1Q9NZ09 502 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 IKZF3Q9UKT9 509 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TMEM98Q9Y2Y6 226 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 ST14Q9Y5Y6 855 aa11.49□□□□□ -0.57
HDAC6-201ENST00000334136 TIMP2P16035 220 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 AZGP1P25311 298 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 RRM2P31350 389 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 SPINT3P49223 89 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 MS4A2Q01362 244 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 GK3PQ14409 553 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 MED22Q15528 200 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 UBE2R2Q712K3 238 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 LRRTM4Q86VH4 590 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 ZC3HC1Q86WB0 502 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 NXPE1Q8N323 547 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 KDM1BQ8NB78 822 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PNPT1Q8TCS8 783 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 RAB2BQ8WUD1 216 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PEX13Q92968 403 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 ISOC1Q96CN7 298 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 TRPV4Q9HBA0 871 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 MRM3Q9HC36 420 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 SPO11Q9Y5K1 396 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PIPSLA2A3N6 862 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 NPIPB15A6NHN6 443 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 GJB3O75712 270 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 DCNP07585 359 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 OPRD1P41143 372 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 CLCQ05315 142 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 MAD2L1Q13257 205 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 C1DQ13901 141 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 NCF4Q15080 339 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 CMPK2Q5EBM0 449 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 KIAA1161Q6NSJ0 714 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 PGBD5Q8N414 524 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 RSPRY1Q96DX4 576 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 TOE1Q96GM8 510 aaKnown RBP11.48□□□□□ -0.57
HDAC6-201ENST00000334136 ZNF778Q96MU6 729 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 TMEM74Q96NL1 305 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
HDAC6-201ENST00000334136 AKTIPQ9H8T0 292 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms