RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ADA2Q9NZK5 511 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 ZIM2Q9NZV7 527 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 NDUFA13Q9P0J0 144 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 NDUFAF1Q9Y375 327 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 POLR3HQ9Y535 204 aaPredicted RBP19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 COMMD3-BMI1R4GMX3 469 aa19.64■□□□□ 0.73
RIPPLY3-201ENST00000329553 TCRBV21S2A2A0A5A6 115 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 BBIP1A8MTZ0 92 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 TCN1P20061 433 aaPredicted RBP19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 HSPA13P48723 471 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 DOC2AQ14183 400 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 HABP4Q5JVS0 413 aaKnown RBP19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 TMEM31Q5JXX7 168 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 CYP20A1Q6UW02 462 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 SATL1Q86VE3 508 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 OR5AR1Q8NGP9 310 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 TFGQ92734 400 aaPredicted RBP19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 ACTL8Q9H568 366 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 LRTM1Q9HBL6 345 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 CLGNO14967 610 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 UGDHO60701 494 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 SEC22BO75396 215 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 SRFP11831 508 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 GABRG2P18507 467 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 TPMTP51580 245 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 RCAN2Q14206 197 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 SMAD2Q15796 467 aaKnown RBP19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 HACD2Q6Y1H2 254 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 PCYOX1LQ8NBM8 494 aa19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 UHRF1Q96T88 793 aaPredicted RBP19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 CFAP20Q9Y6A4 193 aaKnown RBP19.63■□□□□ 0.73
RIPPLY3-201ENST00000329553 ANGPT2O15123 496 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 ACP5P13686 325 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 RPL10P27635 214 aaKnown RBP19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 POLR2JP52435 117 aaKnown RBP19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 TBPL1P62380 186 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 TDGQ13569 410 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 KIAA0040Q15053 153 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 SMU1Q2TAY7 513 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 FRG2Q64ET8 278 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 C8orf82Q6P1X6 216 aaPredicted RBP19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 TSPEARQ8WU66 669 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 VPS33AQ96AX1 596 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 MAGEB10Q96LZ2 347 aaPredicted RBP19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 FRG2BQ96QU4 278 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 SLC2A4RGQ9NR83 387 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 C1orf109Q9NX04 203 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 CROTQ9UKG9 612 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 PCDHGB4Q9UN71 923 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 SLC17A4Q9Y2C5 497 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 PCDHGB5Q9Y5G0 923 aa19.62■□□□□ 0.73
RIPPLY3-201ENST00000329553 POM121BA6NF01 834 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ANKRD28O15084 1053 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 NPPBP16860 134 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 KCNK10P57789 538 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 TFF2Q03403 129 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 TAP2Q03519 686 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 PCDH1Q08174 1060 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 TRAP1Q12931 704 aaKnown RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 RBBP5Q15291 538 aaKnown RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 CAPN13Q6MZZ7 669 aaPredicted RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ZFAND4Q86XD8 727 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 LRRC56Q8IYG6 542 aaPredicted RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 RNF175Q8N4F7 328 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 FLCNQ8NFG4 579 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 NUDT8Q8WV74 236 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ASB12Q8WXK4 309 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 MSANTD3Q96H12 275 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 SLC39A3Q9BRY0 314 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ZNF696Q9H7X3 374 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 CD300AQ9UGN4 299 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 EIF3LQ9Y262 564 aaKnown RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 A0A1W2PP18 115 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ASPDHA6ND91 283 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 LATO43561 262 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 RSL1D1O76021 490 aaKnown RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 CLDN2P57739 230 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 RHDQ02161 417 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 SFSWAPQ12872 951 aaKnown RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 TSTA3Q13630 321 aaPredicted RBP19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 Q6ZS52 159 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 NEIL2Q969S2 332 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 RAD51AP1Q96B01 352 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ROPN1LQ96C74 230 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 IL17FQ96PD4 163 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 SGPP1Q9BX95 441 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 SPAG4Q9NPE6 437 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 ITM2CQ9NQX7 267 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 MOSPD1Q9UJG1 213 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 PLAGL1Q9UM63 463 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 PLEKHM1Q9Y4G2 1056 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 KCNE2Q9Y6J6 123 aa19.61■□□□□ 0.73
RIPPLY3-201ENST00000329553 FAM234BA2RU67 622 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PRORSD1PA6NEY8 169 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PGM3O95394 542 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 TFAP2AP05549 437 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 ZNF26P17031 533 aaPredicted RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 RPL5P46777 297 aaKnown RBP19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 CLCNKAP51800 687 aa19.6■□□□□ 0.73
RIPPLY3-201ENST00000329553 PNLIPRP1P54315 467 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms