RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 KCNK12Q9HB15 430 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 CCDC177Q9NQR7 707 aaPredicted RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 LIMD1Q9UGP4 676 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 FZD4Q9ULV1 537 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 SH2B3Q9UQQ2 575 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 PCDHGA11Q9Y5H2 935 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 PRSS51A0A1B0GVH4 220 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 SDC1P18827 310 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 ATP6V1B2P21281 511 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 CLNS1AP54105 237 aaKnown RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 LIPEQ05469 1076 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 TRIP10Q15642 601 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 CATSPEREQ5SY80 951 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 LPCAT4Q643R3 524 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 MED27Q6P2C8 311 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 IZUMO2Q6UXV1 221 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 OR7G3Q8NG95 312 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 DUS3LQ96G46 650 aaKnown RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 TMEM74Q96NL1 305 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 IL17FQ96PD4 163 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 MTERF1Q99551 399 aaKnown RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 ZNF184Q99676 751 aaPredicted RBP14.45□□□□□ -0.1
TPM3-205ENST00000328159 TRIM15Q9C019 465 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 VCX3BQ9H321 246 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 BRF2Q9HAW0 419 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 VPS29Q9UBQ0 182 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 MCM8Q9UJA3 840 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 PLAGL1Q9UM63 463 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 NCKAP1Q9Y2A7 1128 aa14.45□□□□□ -0.1
TPM3-205ENST00000328159 PCM1Q15154 2024 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 KCNH1O95259 989 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 FUCA1P04066 466 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 RPN2P04844 631 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 PGRP06401 933 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 SLC35G4P0C7Q5 338 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 C1GALT1C1LP0DN25 315 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 PCNAP12004 261 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 TACR1P25103 407 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 MAT2AP31153 395 aaKnown RBP14.44□□□□□ -0.1
TPM3-205ENST00000328159 DMPKQ09013 629 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 MAPKAPK3Q16644 382 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 IER5LQ5T953 404 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 ATG9BQ674R7 924 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 NOXRED1Q6NXP6 359 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 USP30Q70CQ3 517 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 CHST15Q7LFX5 561 aaPredicted RBP14.44□□□□□ -0.1
TPM3-205ENST00000328159 FAM124AQ86V42 546 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 SETD7Q8WTS6 366 aaKnown RBP14.44□□□□□ -0.1
TPM3-205ENST00000328159 SLC5A11Q8WWX8 675 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 GTF2H4Q92759 462 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 REPS1Q96D71 796 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 PPM1MQ96MI6 270 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 TSSK3Q96PN8 268 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 CGREF1Q99674 301 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 KCTD14Q9BQ13 255 aaPredicted RBP14.44□□□□□ -0.1
TPM3-205ENST00000328159 EFCAB11Q9BUY7 163 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 KLHL4Q9C0H6 718 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 PRO3102Q9H379 93 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 EHD1Q9H4M9 534 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 ALG2Q9H553 416 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 RMI1Q9H9A7 625 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 ACSL5Q9ULC5 683 aa14.44□□□□□ -0.1
TPM3-205ENST00000328159 TDRKHQ9Y2W6 561 aaKnown RBP14.44□□□□□ -0.1
TPM3-205ENST00000328159 CROCCQ5TZA2 2017 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 KANSL1LA0AUZ9 987 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 PI15O43692 258 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 CEACAM5P06731 702 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 C7P10643 843 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 ACP5P13686 325 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 PEX2P28328 305 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 CLCNKAP51800 687 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 PPP2CBP62714 309 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 PPP2CAP67775 309 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 PLIN5Q00G26 463 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 PAGE2BQ5JRK9 111 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 ADNP2Q6IQ32 1131 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 LCN8Q6JVE9 175 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 NXPE4Q6UWF7 544 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 OR2T34Q8NGX1 318 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 OR5K2Q8NHB8 316 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 HUS1BQ8NHY5 278 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 ASB12Q8WXK4 309 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 METTL2AQ96IZ6 378 aaKnown RBP14.43□□□□□ -0.1
TPM3-205ENST00000328159 OR52E6Q96RD3 313 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 ECSITQ9BQ95 431 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 TIMM29Q9BSF4 260 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 APOOQ9BUR5 198 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 MUC13Q9H3R2 512 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 COPS7BQ9H9Q2 264 aaPredicted RBP14.43□□□□□ -0.1
TPM3-205ENST00000328159 FZD3Q9NPG1 666 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 ACTR3BQ9P1U1 418 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 EGFL7Q9UHF1 273 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 RIMS3Q9UJD0 308 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 RUVBL1Q9Y265 456 aaKnown RBP14.43□□□□□ -0.1
TPM3-205ENST00000328159 SLC17A4Q9Y2C5 497 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 AP4S1Q9Y587 144 aa14.43□□□□□ -0.1
TPM3-205ENST00000328159 AQP12BA6NM10 295 aa14.42□□□□□ -0.1
TPM3-205ENST00000328159 MAGEB17A8MXT2 336 aa14.42□□□□□ -0.1
TPM3-205ENST00000328159 SLC31A1O15431 190 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms