RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 PCDHB1Q9Y5F3 818 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 E7EQ34 232 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 MAFKO60675 156 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 OR4Q2P0C623 313 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 PORP16435 677 aaPredicted RBP16.08■□□□□ 0.17
SMAD3-201ENST00000327367 UBA1P22314 1058 aaKnown RBP16.08■□□□□ 0.17
SMAD3-201ENST00000327367 LUMP51884 338 aaPredicted RBP16.08■□□□□ 0.17
SMAD3-201ENST00000327367 OR2T5Q6IEZ7 315 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 HSDL2Q6YN16 418 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 OR2T29Q8NH02 315 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 ACOT12Q8WYK0 555 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 HMCESQ96FZ2 354 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 ZDHHC18Q9NUE0 388 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 ERVK-18Q9QC07 812 aa16.08■□□□□ 0.17
SMAD3-201ENST00000327367 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 NEDD8-MDP1E9PL57 170 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 ATG13O75143 517 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 TMEM63AO94886 807 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 SNAP29O95721 258 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 CST3P01034 146 aaPredicted RBP16.08■□□□□ 0.16
SMAD3-201ENST00000327367 F8A1P23610 371 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 RABL3Q5HYI8 236 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 EIF5AL1Q6IS14 154 aaKnown RBP16.08■□□□□ 0.16
SMAD3-201ENST00000327367 STYXQ8WUJ0 223 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 TMEM80Q96HE8 168 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 CD93Q9NPY3 652 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 TAS2R10Q9NYW0 307 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 GIMAP2Q9UG22 337 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 FKBPLQ9UIM3 349 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 ADAMTS6Q9UKP5 1117 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 MRPL3P09001 348 aaKnown RBP16.08■□□□□ 0.16
SMAD3-201ENST00000327367 ZNF35P13682 527 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 ANXA8P13928 327 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 NCBP2P52298 156 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMAD3-201ENST00000327367 SLC16A9Q7RTY1 509 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 SYVN1Q86TM6 617 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 DEDD2Q8WXF8 326 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 ARL6Q9H0F7 186 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 SMURF1Q9HCE7 757 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 MOCS1Q9NZB8 636 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 STBD1O95210 358 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 GSK3BP49841 420 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 JAM2P57087 298 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 NFKB2Q00653 900 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 MAD2L1BPQ15013 274 aaPredicted RBP16.08■□□□□ 0.16
SMAD3-201ENST00000327367 DPY19L3Q6ZPD9 716 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 CEP97Q8IW35 865 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 TUBG2Q9NRH3 451 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 CDH7Q9ULB5 785 aa16.08■□□□□ 0.16
SMAD3-201ENST00000327367 GCATO75600 419 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 BCHEP06276 602 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 BRCC3P46736 316 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 DGKZQ13574 1117 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 CCBE1Q6UXH8 406 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 HFE2Q6ZVN8 426 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 SAMD12Q8N8I0 201 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 TOR1AIP2Q8NFQ8 470 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 SMPDL3BQ92485 455 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 COL21A1Q96P44 957 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 C14orf166Q9Y224 244 aaKnown RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 SLC27A6Q9Y2P4 619 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 MEIS2O14770 477 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 DNASE1P24855 282 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ZNF675Q8TD23 568 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 NKD2Q969F2 451 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 PAK1IP1Q9NWT1 392 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 NUAK1O60285 661 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ECI2O75521 394 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ADORA2AP29274 412 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 TSTD2Q5T7W7 516 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 LIPKQ5VXJ0 399 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ARHGEF4Q9NR80 690 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ERVK-25P63136 954 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ERMP1Q7Z2K6 904 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 THEM6Q8WUY1 208 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 IDI2Q9BXS1 227 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 YTHDF1Q9BYJ9 559 aaKnown RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ADRA1BP35368 520 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 CDKN2CP42773 168 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ZNF45Q02386 682 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ZNF181Q2M3W8 571 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 FBXO43Q4G163 708 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 DCAF12L1Q5VU92 463 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ZNF280BQ86YH2 543 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 PYCR2Q96C36 320 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 ASPNQ9BXN1 380 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 DPEP3Q9H4B8 488 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 RANBP3Q9H6Z4 567 aaPredicted RBP16.07■□□□□ 0.16
SMAD3-201ENST00000327367 OXSMQ9NWU1 459 aa16.07■□□□□ 0.16
SMAD3-201ENST00000327367 CLIC1O00299 241 aa16.06■□□□□ 0.16
SMAD3-201ENST00000327367 HMGB3O15347 200 aaKnown RBP16.06■□□□□ 0.16
SMAD3-201ENST00000327367 IFNA2P01563 188 aa16.06■□□□□ 0.16
SMAD3-201ENST00000327367 DPEP1P16444 411 aa16.06■□□□□ 0.16
SMAD3-201ENST00000327367 PRAMEF19Q5SWL8 479 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms