RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TIMM22Q9Y584 194 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 ANGPTL3Q9Y5C1 460 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 CCNT2O60583 730 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 STK16O75716 305 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 PRR35P0CG20 571 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 ACADVLP49748 655 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 SLC25A3Q00325 362 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 TCF15Q12870 199 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 GRB7Q14451 532 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 TRIM61Q5EBN2 209 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 LETMD1Q6P1Q0 360 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 RNF165Q6ZSG1 346 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 DCUN1D3Q8IWE4 304 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 FAM46DQ8NEK8 389 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 ATP6V1E2Q96A05 226 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 TUBGCP3Q96CW5 907 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 FERD3LQ96RJ6 166 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 THTPAQ9BU02 230 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 NTMT1Q9BV86 223 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 ARRDC1-AS1Q9H2J1 176 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 TRIT1Q9H3H1 467 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 DENND2DQ9H6A0 471 aaPredicted RBP18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 RAB23Q9ULC3 237 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 PLAGL1Q9UM63 463 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 DNAH14Q0VDD8 3507 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 YY2O15391 372 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 KATNA1O75449 491 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 LINC00032P0C843 101 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 ITGAXP20702 1163 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 MPLP40238 635 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 CCNG1P51959 295 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 STX1BP61266 288 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 BNIP3Q12983 259 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 TRAF3Q13114 568 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 FASTKQ14296 549 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 ZNF423Q2M1K9 1284 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 ZXDCQ2QGD7 858 aaPredicted RBP18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 IYDQ6PHW0 289 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 LRRC70Q7Z2Q7 622 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 SPATA19Q7Z5L4 167 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 MILR1Q7Z6M3 343 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 GKN2Q86XP6 184 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 CDYL2Q8N8U2 506 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 OR4F6Q8NGB9 312 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 NRTNQ99748 197 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 SLC32A1Q9H598 525 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 RIC8BQ9NVN3 520 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 NDE1Q9NXR1 346 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 SLC6A14Q9UN76 642 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 BTRCQ9Y297 605 aa18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 TDRKHQ9Y2W6 561 aaKnown RBP18.16■□□□□ 0.5
EXOSC3-201ENST00000327304 PCDH15Q96QU1 1955 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 ADAMTS9Q9P2N4 1935 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 B4DGG1 531 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 PSMD12O00232 456 aaPredicted RBP18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 RPN2P04844 631 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 ALDOCP09972 364 aaKnown RBP18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 EBLN1P0CF75 366 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 EPB42P16452 691 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 SLC19A1P41440 591 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 RXRGP48443 463 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 MRPL19P49406 292 aaKnown RBP18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 GSTA3Q16772 222 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 HLA-BQ31612 363 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 SLC23A3Q6PIS1 610 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 ULK2Q8IYT8 1036 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 TBC1D21Q8IYX1 336 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 NAGSQ8N159 534 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 OR9A1PQ8NGU1 263 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 METTL6Q8TCB7 284 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 MAGEC3Q8TD91 643 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 EFCAB1Q9HAE3 211 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 IL21RQ9HBE5 538 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 PTGDR2Q9Y5Y4 395 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 FRYLO94915 3013 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 WDR87Q6ZQQ6 2873 aa18.15■□□□□ 0.5
EXOSC3-201ENST00000327304 MYO15AQ9UKN7 3530 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 A0A088AWK7 358 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 LMO7DNF2Z398 122 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 SLC16A8O95907 504 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 CAPN1P07384 714 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 HGFP14210 728 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 ARRB1P49407 418 aaPredicted RBP18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 STX5Q13190 355 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 DEFB133Q30KQ1 61 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 C16orf89Q6UX73 402 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 LMNTD1Q8N9Z9 388 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 KYQ8NBH2 561 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 OR2I1PQ8NGU4 316 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 ZDHHC1Q8WTX9 485 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 FBXL8Q96CD0 374 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 CCDC138Q96M89 665 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 IL17FQ96PD4 163 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 CDK15Q96Q40 435 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 MVB12BQ9H7P6 319 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 STOX2Q9P2F5 926 aaPredicted RBP18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 TRPS1Q9UHF7 1281 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 DOLKQ9UPQ8 538 aa18.14■□□□□ 0.5
EXOSC3-201ENST00000327304 PCDHGA5Q9Y5G8 931 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms