RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 MLPHQ9BV36 600 aaPredicted RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SHARPINQ9H0F6 387 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 FANCEQ9HB96 536 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 GOLGA6AQ9NYA3 693 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 MATN3O15232 486 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SMAD6O43541 496 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 UBXN7O94888 489 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 MT-CO1P00395 513 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SRD5A1P18405 259 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 GCAP28676 217 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 STX2P32856 288 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 GBE1Q04446 702 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 AUHQ13825 339 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SQLEQ14534 574 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 TEX44Q53QW1 395 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 TMTC4Q5T4D3 741 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 RAP1GAP2Q684P5 730 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 TIFABQ6ZNK6 161 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 C20orf204Q6ZNR8 217 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 CAND1Q86VP6 1230 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 FAM71DQ8N9W8 422 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 MZB1Q8WU39 189 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 ALKBH8Q96BT7 664 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 TEKT5Q96M29 485 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 WRAP53Q9BUR4 548 aaKnown RBP6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SUFUQ9UMX1 484 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 SLC17A4Q9Y2C5 497 aa6.37□□□□□ -1.39
CSTF3-201ENST00000323959 LOC100653049A0A140TA62 436 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 TSPAN11A1L157 253 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 TMEM89A2RUT3 159 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 H7C0C1 242 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 TCF21O43680 179 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PAGE1O75459 146 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 KRT34O76011 436 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 AP2A1O95782 977 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PEX11BO96011 259 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 AMPD1P23109 780 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PTPN3P26045 913 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 CAPZBP47756 277 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ATP5OP48047 213 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 NPY2RP49146 381 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 C6orf52Q5T4I8 152 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 NPNTQ6UXI9 565 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 LINC00696Q6ZRV3 163 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 LINC00523Q86TU6 105 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 TTC7BQ86TV6 843 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 AMER3Q8N944 861 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 UBLCP1Q8WVY7 318 aaPredicted RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 SIGLEC10Q96LC7 697 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 WDR83Q9BRX9 315 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 MCMBPQ9BTE3 642 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 TEX101Q9BY14 249 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ZYG11BQ9C0D3 744 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 MUC3BQ9H195 1237 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 HAUS2Q9NVX0 235 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 MOCS1Q9NZB8 636 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PTRH2Q9Y3E5 179 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ASPDHA6ND91 283 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 FAM159BA6NKW6 160 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 FAM72CH0Y354 149 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 K7ERQ8 282 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PIK3R2O00459 728 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 RASGRF2O14827 1237 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ASNA1O43681 348 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 VEGFDO43915 354 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 MAFKO60675 156 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 POP4O95707 220 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 GJC1P36383 396 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 GPX6P59796 221 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 UBE2IP63279 158 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ETFDHQ16134 617 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 CEP85LQ5SZL2 805 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ZFYVE27Q5T4F4 411 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 FAM72AQ5TYM5 149 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 FAM72DQ6L9T8 149 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 IYDQ6PHW0 289 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 GDPD4Q6W3E5 623 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 SETD3Q86TU7 594 aaPredicted RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 LCA5Q86VQ0 697 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 FAM72BQ86X60 149 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PYROXD2Q8N2H3 581 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 EDEM1Q92611 657 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ARL8AQ96BM9 186 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF501Q96CX3 271 aaPredicted RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 MTBPQ96DY7 904 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PERPQ96FX8 193 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 TBC1D10AQ9BXI6 508 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 SLC6A16Q9GZN6 736 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.36□□□□□ -1.393e-6■■□□□ 13.6
CSTF3-201ENST00000323959 LRRC40Q9H9A6 602 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 PDFQ9HBH1 243 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 GPATCH2LQ9NWQ4 482 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 VPS18Q9P253 973 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 XPO7Q9UIA9 1087 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 AAR2Q9Y312 384 aaKnown RBP6.36□□□□□ -1.39
CSTF3-201ENST00000323959 ASB1Q9Y576 335 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 WNK1Q9H4A3 2382 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms