RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 DNAJB9Q9UBS3 223 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ZNF487B1APH4 448 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 INPPL1O15357 1258 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 RASAL1O95294 804 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 SLC15A1P46059 708 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CD47Q08722 323 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 TUBB3Q13509 450 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 ABRAXAS2Q15018 415 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 LRRC66Q68CR7 880 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 SUSD1Q6UWL2 747 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 PLEKHG7Q6ZR37 379 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 HOMEZQ8IX15 550 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 ANKFN1Q8N957 763 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 ASCC1Q8N9N2 400 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 SH3RF2Q8TEC5 729 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 SH3YL1Q96HL8 342 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 OSBPL10Q9BXB5 764 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CLEC4MQ9H2X3 399 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 TNFRSF12AQ9NP84 129 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 NKIRAS2Q9NYR9 191 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CRNNQ9UBG3 495 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 WNT6Q9Y6F9 365 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CEP350Q5VT06 3117 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 A0A1W2PP18 115 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 A0A1W2PQ45 241 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 A0A1W2PQY0 241 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 LCHNA4D1U4 455 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 MITFO75030 526 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 BLVRAP53004 296 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 SEMA3AQ14563 771 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 PHKG1Q16816 387 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 BBS7Q8IWZ6 715 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 FRS2Q8WU20 508 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 TMEM203Q969S6 136 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 OTUB1Q96FW1 271 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 GSTO2Q9H4Y5 243 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 PAK1IP1Q9NWT1 392 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 HAS3O00219 553 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 RFPL2O75678 378 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 SLC6A4P31645 630 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 POLR2IP36954 125 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 SNRPD2P62316 118 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 FCHO2Q0JRZ9 810 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 TBRG1Q3YBR2 411 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CST9Q5W186 159 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 DEF8Q6ZN54 512 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 KRT73Q86Y46 540 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 ELMOD2Q8IZ81 293 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 LGALS12Q96DT0 336 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 C8orf48Q96LL4 319 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 KCNC2Q96PR1 638 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 TRNT1Q96Q11 434 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 RTP3Q9BQQ7 232 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CCNB1IP1Q9NPC3 277 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 KLHL1Q9NR64 748 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 IMP3Q9NV31 184 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 ARFGEF1Q9Y6D6 1849 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 SLC28A1O00337 649 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 GANABQ14697 944 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 RFTN2Q52LD8 501 aaPredicted RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 RBM48Q5RL73 367 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 RPL3LQ92901 407 aaKnown RBP14.87□□□□□ -0.03
VARS2-201ENST00000321897 C1GALT1C1Q96EU7 318 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 CMTM6Q9NX76 183 aa14.87□□□□□ -0.03
VARS2-201ENST00000321897 H3BM21 787 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 ZNF623O75123 536 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 STC2O76061 302 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 CYP11A1P05108 521 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 RPS7P62081 194 aaKnown RBP14.86□□□□□ -0.03
VARS2-201ENST00000321897 RFTN1Q14699 578 aaPredicted RBP14.86□□□□□ -0.03
VARS2-201ENST00000321897 TMEM220Q6QAJ8 160 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.86□□□□□ -0.03
VARS2-201ENST00000321897 CYS1Q717R9 158 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 CHST9Q7L1S5 443 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 KRT74Q7RTS7 529 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 CYP2U1Q7Z449 544 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 HID1Q8IV36 788 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 SIPA1Q96FS4 1042 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 NARS2Q96I59 477 aaKnown RBP14.86□□□□□ -0.03
VARS2-201ENST00000321897 PSKH2Q96QS6 385 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 TDRD1Q9BXT4 1180 aaKnown RBP14.86□□□□□ -0.03
VARS2-201ENST00000321897 DNAJC11Q9NVH1 559 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 C1orf109Q9NX04 203 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 KCTD5Q9NXV2 234 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 NHSQ6T4R5 1651 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 BMP2P12643 396 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 HLA-EP13747 358 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 MAT2AP31153 395 aaKnown RBP14.86□□□□□ -0.03
VARS2-201ENST00000321897 KRT20P35900 424 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 CNTN1Q12860 1018 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 APOFQ13790 326 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 NHSL2Q5HYW2 709 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 HDDC2Q7Z4H3 204 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 CHPFQ8IZ52 775 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 OR4K1Q8NGD4 311 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 KAT2AQ92830 837 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 PHOX2BQ99453 314 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 SLC30A3Q99726 388 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 TCF25Q9BQ70 676 aa14.86□□□□□ -0.03
VARS2-201ENST00000321897 NOS1APO75052 506 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms