RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZIC5Q96T25 663 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 SLC35A5Q9BS91 424 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 XKR8Q9H6D3 395 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 SMOXQ9NWM0 555 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 USP22Q9UPT9 525 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 INSL5Q9Y5Q6 135 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 OAS3Q9Y6K5 1087 aaKnown RBP16.06■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF780BQ9Y6R6 833 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 CEP250Q9BV73 2442 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF840PA6NDX5 716 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 H3BNX3 289 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 QSOX1O00391 747 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 KDELR3O43731 214 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 SCN2BO60939 215 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 DNTTP04053 509 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 TAS2R50P59544 299 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 COPZ1P61923 177 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 ILF2Q12905 390 aaKnown RBP16.06■□□□□ 0.16
CLIP4-201ENST00000320081 TRAP1Q12931 704 aaKnown RBP16.06■□□□□ 0.16
CLIP4-201ENST00000320081 CDC73Q6P1J9 531 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 ARHGAP12Q8IWW6 846 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 RNF175Q8N4F7 328 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF433Q8N7K0 673 aaPredicted RBP16.06■□□□□ 0.16
CLIP4-201ENST00000320081 NUDT8Q8WV74 236 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 KCNJ9Q92806 393 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
CLIP4-201ENST00000320081 FCRL4Q96PJ5 515 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 OSBPL10Q9BXB5 764 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 POLE4Q9NR33 117 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 SQORQ9Y6N5 450 aa16.06■□□□□ 0.16
CLIP4-201ENST00000320081 DYTNA2CJ06 578 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 FADS2P1A8MWK0 482 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 WNT9AO14904 365 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 UGT2B11O75310 529 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 FGBP02675 491 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 FYNP06241 537 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 NT5EP21589 574 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 PTGER1P34995 402 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ASMTP46597 345 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ATP13A5Q4VNC0 1218 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TAS1R1Q7RTX1 841 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 VTCN1Q7Z7D3 282 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 DIRAS2Q96HU8 199 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 HERC2P3Q9BVR0 1158 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 STMN3Q9NZ72 180 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 SSR3Q9UNL2 185 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 HEMK1Q9Y5R4 338 aaPredicted RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 OR5F1O95221 314 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CDH1P12830 882 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 APLP1P51693 650 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 EEFSECP57772 596 aaKnown RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 NXPE1Q8N323 547 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 OR10G2Q8NGC3 310 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 POLR1DQ9Y2S0 133 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 LTBP3Q9NS15 1303 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CLDN25C9JDP6 229 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TSPAN6O43657 245 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ATP1B2P14415 290 aaPredicted RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ITPKBP27987 946 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ID2Q02363 134 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF846Q147U1 533 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CLLU1OSQ5K130 101 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TPRG1Q6ZUI0 275 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF438Q7Z4V0 828 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 SLC38A2Q96QD8 506 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 DHRS4Q9BTZ2 278 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 RPF2Q9H7B2 306 aaKnown RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 ENOPH1Q9UHY7 261 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CHURC1-FNTBB4DL54 471 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 PAK4O96013 591 aaPredicted RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 BCHEP06276 602 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 PTPN2P17706 415 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CDKL1Q00532 357 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 SCAPQ12770 1279 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 LMAN2Q12907 356 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CBX3Q13185 183 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 CMTR2Q8IYT2 770 aaKnown RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 OR52L1Q8NGH7 329 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 IPCEF1Q8WWN9 437 aaPredicted RBP16.05■□□□□ 0.16
CLIP4-201ENST00000320081 MAL2Q969L2 176 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TTTY10Q9BZA0 68 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 MAF1Q9H063 256 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 TBC1D14Q9P2M4 693 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 GULP1Q9UBP9 304 aa16.05■□□□□ 0.16
CLIP4-201ENST00000320081 C9P02748 559 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 OXTRP30559 389 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 PGFP49763 221 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 ERVPABLB-1P60509 514 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 IL18R1Q13478 541 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 MINDY4Q4G0A6 757 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 HLA-DQA1Q5Y7H0 255 aa16.04■□□□□ 0.16
CLIP4-201ENST00000320081 PM20D1Q6GTS8 502 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms