RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MYBPC3Q14896 1274 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 UGT3A1Q6NUS8 523 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 JMJD6Q6NYC1 403 aaPredicted RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 PRMT9Q6P2P2 845 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM1-203ENST00000317516 FBXO15Q8NCQ5 510 aaPredicted RBP16.99■□□□□ 0.31
TPM1-203ENST00000317516 TM9SF4Q92544 642 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 SIGLEC10Q96LC7 697 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 GRPEL1Q9HAV7 217 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 CDC23Q9UJX2 597 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 FBXO5Q9UKT4 447 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 DHRS7Q9Y394 339 aa16.99■□□□□ 0.31
TPM1-203ENST00000317516 OR2A25A4D2G3 310 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 KRT87PA6NCN2 255 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 TTC4O95801 387 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 TCP1P17987 556 aaKnown RBP16.98■□□□□ 0.31
TPM1-203ENST00000317516 SLC1A2P43004 574 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 SOX8P57073 446 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 OCA2Q04671 838 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 PRDX1Q06830 199 aaKnown RBP16.98■□□□□ 0.31
TPM1-203ENST00000317516 AIMP2Q13155 320 aaKnown RBP16.98■□□□□ 0.31
TPM1-203ENST00000317516 RAPSNQ13702 412 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 NKG7Q16617 165 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 MUM1Q2TAK8 710 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 FBXO42Q6P3S6 717 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 SUSD1Q6UWL2 747 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 RNF44Q7L0R7 432 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 PPP1R32Q7Z5V6 425 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 GALNT11Q8NCW6 608 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 ASB11Q8WXH4 323 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 COL26A1Q96A83 441 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 PNPLA2Q96AD5 504 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 PKP4Q99569 1192 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 PLCD4Q9BRC7 762 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 NAT9Q9BTE0 207 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 ZNF304Q9HCX3 659 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 TRMT1Q9NXH9 659 aaKnown RBP16.98■□□□□ 0.31
TPM1-203ENST00000317516 ASIC3Q9UHC3 531 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 CDC14AQ9UNH5 594 aa16.98■□□□□ 0.31
TPM1-203ENST00000317516 BSNQ9UPA5 3926 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 EIF3FO00303 357 aaPredicted RBP16.97■□□□□ 0.31
TPM1-203ENST00000317516 SYF2O95926 243 aaKnown RBP16.97■□□□□ 0.31
TPM1-203ENST00000317516 PGAM1P18669 254 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 SKIV2L2P42285 1042 aaKnown RBP16.97■□□□□ 0.31
TPM1-203ENST00000317516 OR1D4P47884 311 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 EMP3P54852 163 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 ABATP80404 500 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 HSP90AA5PQ58FG0 334 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 RNASEH2BQ5TBB1 312 aaKnown RBP16.97■□□□□ 0.31
TPM1-203ENST00000317516 IRAK1BP1Q5VVH5 260 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 FRMPD2BQ6IN97 320 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 LRRC8EQ6NSJ5 796 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 ZNF549Q6P9A3 640 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 KCNMB4Q86W47 210 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 FAM26EQ8N5C1 309 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 GPR21Q99679 349 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 EBNA1BP2Q99848 306 aaKnown RBP16.97■□□□□ 0.31
TPM1-203ENST00000317516 MFRPQ9BY79 579 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 SEMA3GQ9NS98 782 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 MAP4K5Q9Y4K4 846 aa16.97■□□□□ 0.31
TPM1-203ENST00000317516 LOC105369274A0A096LPK9 316 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 LOC102723532A0A0G2JNH3 316 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 GFYI3L273 518 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 TXNDC9O14530 226 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 PRPF4O43172 522 aaKnown RBP eCLIP16.96■□□□□ 0.31
TPM1-203ENST00000317516 SORBS2O94875 1100 aaKnown RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 HAUS5O94927 633 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 SLC16A8O95907 504 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 CARSP49589 748 aaKnown RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 RELAQ04206 551 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 CUL1Q13616 776 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 THEMIS2Q5TEJ8 643 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 ICE2Q659A1 982 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 SLC6A19Q695T7 634 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 COX15Q7KZN9 410 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 PALM2Q8IXS6 379 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 OR4N4Q8N0Y3 316 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 ZADH2Q8N4Q0 377 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 RBMXL3Q8N7X1 1067 aaKnown RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 RERGQ96A58 199 aaPredicted RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 CABS1Q96KC9 395 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 SPSB2Q99619 263 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 SLC30A3Q99726 388 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 AARSD1Q9BTE6 412 aaKnown RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 ZNF552Q9H707 407 aaPredicted RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 SLC6A20Q9NP91 592 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 IARS2Q9NSE4 1012 aaKnown RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 ZNF282Q9UDV7 671 aaPredicted RBP16.96■□□□□ 0.31
TPM1-203ENST00000317516 TAC3Q9UHF0 121 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 MAU2Q9Y6X3 613 aa16.96■□□□□ 0.31
TPM1-203ENST00000317516 VSTM2BA6NLU5 285 aa16.95■□□□□ 0.3
TPM1-203ENST00000317516 E7ENX8 843 aa16.95■□□□□ 0.3
TPM1-203ENST00000317516 H0YGG7 62 aa16.95■□□□□ 0.3
TPM1-203ENST00000317516 SMAPO00193 183 aa16.95■□□□□ 0.3
TPM1-203ENST00000317516 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
TPM1-203ENST00000317516 ITGA3P26006 1051 aa16.95■□□□□ 0.3
TPM1-203ENST00000317516 RGS4P49798 205 aa16.95■□□□□ 0.3
TPM1-203ENST00000317516 FOXL2P58012 376 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms