RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 VAT1LQ9HCJ6 419 aa3.88□□□□□ -1.79
SMCO3-201ENST00000316048 PLIN4Q96Q06 1357 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 MYH1P12882 1939 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 IGKV6D-41A0A0C4DH26 115 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 TMEM221A6NGB7 291 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 TRIM64A6NGJ6 449 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 TRIM64BA6NI03 449 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 POLR2DO15514 142 aaKnown RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 CYTH3O43739 400 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 OR10H2O60403 315 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 SYNCRIPO60506 623 aaKnown RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 FMO6PO60774 539 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 GOLGA8HP0CJ92 632 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 LONP1P36776 959 aaKnown RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 FASLGP48023 281 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 PNRC1Q12796 327 aaPredicted RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 HSPB3Q12988 150 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 PTPRCAPQ14761 206 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 Q75L30 129 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 GET4Q7L5D6 327 aaPredicted RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 CCDC91Q7Z6B0 441 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 DEFB132Q7Z7B7 95 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 MFN1Q8IWA4 741 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 TRIML1Q8N9V2 468 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 FIBINQ8TAL6 211 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 DENND1AQ8TEH3 1009 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 ROBO4Q8WZ75 1007 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 EXT2Q93063 718 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 SORCS2Q96PQ0 1159 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 FERMT1Q9BQL6 677 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 RBM38Q9H0Z9 239 aaKnown RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 GLT8D2Q9H1C3 349 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 NYAP2Q9P242 653 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 IL36RNQ9UBH0 155 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 IL17BQ9UHF5 180 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 AGO1Q9UL18 857 aaKnown RBP3.87□□□□□ -1.79
SMCO3-201ENST00000316048 QSER1Q2KHR3 1735 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 MYH6P13533 1939 aa3.87□□□□□ -1.79
SMCO3-201ENST00000316048 ESYT2A0FGR8 921 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 WDR91A4D1P6 747 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ANXA2P2A6NMY6 339 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PTGESO14684 152 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 IKBKBO14920 756 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MOSPD3O75425 235 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 KDM4BO94953 1096 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 DANCRP0C864 163 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SNHG28P0DPA3 235 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PDHBP11177 359 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MYOD1P15172 320 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 DPEP1P16444 411 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ZNF75DP51815 510 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 TPD52P55327 224 aaPredicted RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 TUBB4BP68371 445 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ORC2Q13416 577 aaPredicted RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PNOCQ13519 176 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 NONOQ15233 471 aaKnown RBP eCLIP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 TATDN1Q6P1N9 297 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 C11orf57Q6ZUT1 292 aaPredicted RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 TMEM179Q6ZVK1 233 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 DSG4Q86SJ6 1040 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 FJX1Q86VR8 437 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MAP7D3Q8IWC1 876 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 C1orf52Q8N6N3 182 aaKnown RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MLKLQ8NB16 471 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PTP4A1Q93096 173 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ST6GALNAC6Q969X2 333 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MMADHCQ9H3L0 296 aaPredicted RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 TDRD3Q9H7E2 651 aaKnown RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 RRAGDQ9NQL2 400 aaPredicted RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 NPAP1Q9NZP6 1156 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PADI2Q9Y2J8 665 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ATXN2Q99700 1313 aaKnown RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ECM29Q5VYK3 1845 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SLX4Q8IY92 1834 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 CDK5RAP2Q96SN8 1893 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 CCDC188H7C350 402 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 DNM1LO00429 736 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MID1O15344 667 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MED24O75448 989 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 CLDN14O95500 239 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 EEF2P13639 858 aaKnown RBP3.86□□□□□ -1.79
SMCO3-201ENST00000316048 S1PR1P21453 382 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PTPN3P26045 913 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PRPHP41219 470 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SLC1A4P43007 532 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 ABCG1P45844 678 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 Q0VFX4 171 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PLA2G7Q13093 441 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 XKR9Q5GH70 373 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 TMPRSS11FQ6ZWK6 438 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 PLA2G4DQ86XP0 818 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SPC24Q8NBT2 197 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 MOSPD2Q8NHP6 518 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 GRK7Q8WTQ7 553 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 SLC20A1Q8WUM9 679 aa3.86□□□□□ -1.79
SMCO3-201ENST00000316048 DHX58Q96C10 678 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms