RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 FRG2BQ96QU4 278 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 INSM2Q96T92 566 aaPredicted RBP6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 BRINP2Q9C0B6 783 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 ABCG4Q9H172 646 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 NANOGQ9H9S0 305 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 SPAG4Q9NPE6 437 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 TAC3Q9UHF0 121 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 DNTTP04053 509 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 TPMTP51580 245 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 AQP4P55087 323 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 KCNK10P57789 538 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 RPS13P62277 151 aaKnown RBP6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 CDC16Q13042 620 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 ZNF776Q68DI1 518 aaPredicted RBP6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 SLC30A9Q6PML9 568 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 IZUMO2Q6UXV1 221 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 NRSN1Q8IZ57 195 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 CLECL1Q8IZS7 167 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 CANT1Q8WVQ1 401 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 GLMNQ92990 594 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 GPATCH1Q9BRR8 931 aaKnown RBP6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 FOXQ1Q9C009 403 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 C6orf106Q9H6K1 298 aaPredicted RBP6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 SGK2Q9HBY8 427 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 TMEM181Q9P2C4 612 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 CD300AQ9UGN4 299 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 CACNA1IQ9P0X4 2223 aa6.77□□□□□ -1.33
LYSMD3-201ENST00000315948 A0A1W2PP18 115 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PSMD11O00231 422 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TIPRLO75663 272 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 AP2A2O94973 939 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TBX6O95947 436 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 IL9P15248 144 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 GABRG2P18507 467 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 C5AR1P21730 350 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 VASPP50552 380 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 STX5Q13190 355 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 SLBPQ14493 270 aaKnown RBP eCLIP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 HERC3Q15034 1050 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIP10Q15642 601 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TMEM259Q4ZIN3 620 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 OR4F3Q6IEY1 312 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 ZFAND4Q86XD8 727 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 ARHGAP24Q8N264 748 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PGBD3Q8N328 593 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 OR7G3Q8NG95 312 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 OR2L2Q8NH16 312 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 WDR48Q8TAF3 677 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 LRTOMTQ8WZ04 291 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 NUSAP1Q9BXS6 441 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIM54Q9BYV2 358 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PCM1Q15154 2024 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MGAT4DA6NG13 374 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 H7BY64 318 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 RNASEH1O60930 286 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 NME6O75414 186 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 CATP04040 527 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 NELFEP18615 380 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MAOBP27338 520 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 ACADVLP49748 655 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 EMX2Q04743 252 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 SGCGQ13326 291 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TAF11Q15544 211 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MUM1Q2TAK8 710 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 HKDC1Q2TB90 917 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 FAM46CQ5VWP2 391 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 LRRC56Q8IYG6 542 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 GALNT4Q8N4A0 578 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 C1orf52Q8N6N3 182 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 AMER3Q8N944 861 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TMEM125Q96AQ2 219 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 FBXL8Q96CD0 374 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 C12orf66Q96MD2 445 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PRAP1Q96NZ9 151 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TMEM168Q9H0V1 697 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 CARS2Q9HA77 564 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 GEMIN8Q9NWZ8 242 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 EPS15L1Q9UBC2 864 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 KLF15Q9UIH9 416 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 CYP8B1Q9UNU6 501 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PLXND1Q9Y4D7 1925 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 ASXL3Q9C0F0 2248 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PRKRAO75569 313 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MPC1LP0DKB6 136 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 GSK3BP49841 420 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 RAE1P78406 368 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 NRF1Q16656 503 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 SLCO4C1Q6ZQN7 724 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIM46Q7Z4K8 759 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 WDR20Q8TBZ3 569 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 OR1E3Q8WZA6 343 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 GABRG3Q99928 467 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 DPH2Q9BQC3 489 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 RIC8BQ9NVN3 520 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 C1orf109Q9NX04 203 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 NDE1Q9NXR1 346 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 SPHK1Q9NYA1 384 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms