RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MTX3Q5HYI7 312 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 TBCELQ5QJ74 424 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 TMEM154Q6P9G4 183 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 DNAJC14Q6Y2X3 702 aaPredicted RBP17.77■□□□□ 0.44
CCDC43-201ENST00000315286 AMZ2Q86W34 360 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 MSRB3Q8IXL7 192 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 FAM9CQ8IZT9 166 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 EME1Q96AY2 570 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 FCRL1Q96LA6 429 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 RIPOR3Q96MK2 946 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 TM7SF3Q9NS93 570 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 GPRC5BQ9NZH0 403 aa17.77■□□□□ 0.44
CCDC43-201ENST00000315286 MAGEB17A8MXT2 336 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 AKAP10O43572 662 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ETHE1O95571 254 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 PAK4O96013 591 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ACPPP15309 386 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ZNF26P17031 533 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 PSMA4P25789 261 aaKnown RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 S100A3P33764 101 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 TAP2Q03519 686 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 E2F2Q14209 437 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 FGL2Q14314 439 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 CYP51A1Q16850 503 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 AASDHQ4L235 1098 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 CATSPEREQ5SY80 951 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 TMPRSS11BQ86T26 416 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 RIMKLAQ8IXN7 391 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 LRRC56Q8IYG6 542 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 PHC3Q8NDX5 983 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 OR7G3Q8NG95 312 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 KLK6Q92876 244 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 GFM2Q969S9 779 aaKnown RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ZNF583Q96ND8 569 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 SGPP1Q9BX95 441 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 MKRN2Q9H000 416 aaKnown RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 IKZF5Q9H5V7 419 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 RPF2Q9H7B2 306 aaKnown RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 SLC6A13Q9NSD5 602 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ZFR2Q9UPR6 939 aaKnown RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 PCDHB3Q9Y5E6 796 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 PCDHGA11Q9Y5H2 935 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 NUP214P35658 2090 aaPredicted RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 MAGEA13PA6NCF6 341 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 TXNDC9O14530 226 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 IL10P22301 178 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 SF1Q15637 639 aaKnown RBP17.76■□□□□ 0.43
CCDC43-201ENST00000315286 PGS1Q32NB8 556 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 GTDC1Q4AE62 458 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ERMP1Q7Z2K6 904 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 LRRTM4Q86VH4 590 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 CSGALNACT1Q8TDX6 532 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 TESCQ96BS2 214 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 COQ10BQ9H8M1 238 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 SERHLQ9NQF3 203 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 CLDND1Q9NY35 253 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 ASF1AQ9Y294 204 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 OR1A2Q9Y585 309 aa17.76■□□□□ 0.43
CCDC43-201ENST00000315286 EYSQ5T1H1 3165 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 SH3BGRLO75368 114 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 B3GALT4O96024 378 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PCNAP12004 261 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 AGERQ15109 404 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 ZNF776Q68DI1 518 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-201ENST00000315286 GLYATQ6IB77 296 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 UNC5DQ6UXZ4 953 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PROSER1Q86XN7 944 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 OR5AR1Q8NGP9 310 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 HUS1BQ8NHY5 278 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 THUMPD3Q9BV44 507 aaKnown RBP17.75■□□□□ 0.43
CCDC43-201ENST00000315286 TEX101Q9BY14 249 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PAIP1Q9H074 479 aaKnown RBP17.75■□□□□ 0.43
CCDC43-201ENST00000315286 BRF2Q9HAW0 419 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 ITM2CQ9NQX7 267 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 CNOT11Q9UKZ1 510 aaKnown RBP17.75■□□□□ 0.43
CCDC43-201ENST00000315286 TRBV5-3A0A0A0MS03 114 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 HNRNPRO43390 633 aaKnown RBP17.75■□□□□ 0.43
CCDC43-201ENST00000315286 TPST1O60507 370 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 GPIP06744 558 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 LYNP07948 512 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PNLIPRP1P54315 467 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 CYP4F3Q08477 520 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 RPA4Q13156 261 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 IRF4Q15306 451 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 RUNDC3AQ59EK9 446 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 TMEM196Q5HYL7 178 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PDZD3Q86UT5 571 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 ANKRD46Q86W74 232 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 DTWD1Q8N5C7 304 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 OR10A6Q8NH74 314 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 GANCQ8TET4 914 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 BIRC7Q96CA5 298 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 C11orf24Q96F05 449 aaPredicted RBP17.75■□□□□ 0.43
CCDC43-201ENST00000315286 IL17FQ96PD4 163 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 HHIPQ96QV1 700 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 INPP5KQ9BT40 448 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 SLC6A17Q9H1V8 727 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 KCNH6Q9H252 994 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 FBXL12Q9NXK8 326 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms