RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SETD7Q8WTS6 366 aaKnown RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 AKAP1Q92667 903 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM74Q96NL1 305 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 NPAS2Q99743 824 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TTYH1Q9H313 450 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 OAZ3Q9UMX2 235 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 V9GYQ6 96 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CEP290O15078 2479 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 KCNQ2O43526 872 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 INMTO95050 263 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 KAT7O95251 611 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 RLN2P04090 185 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SERPIND1P05546 499 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ST3GAL3Q11203 375 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SELPLGQ14242 412 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 PPP2R2DQ66LE6 453 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 NRSN1Q8IZ57 195 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 C11orf24Q96F05 449 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 DUSP26Q9BV47 211 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SGK2Q9HBY8 427 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CSPG5O95196 566 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF286BP0CG31 522 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CD36P16671 472 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF37AP17032 561 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SLC9A3P48764 834 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SPARTQ8N0X7 666 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 C10orf53Q8N6V4 93 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CRYGNQ8WXF5 182 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 NPY6RQ99463 290 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 RAI2Q9Y5P3 530 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ATP6AP2A0A1C7CYW4 349 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 H1F0P07305 194 aaKnown RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CKMT1AP12532 417 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CMPK1P30085 196 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MAGEA2P43356 314 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 RPS5P46782 204 aaKnown RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MAPK12P53778 367 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 OR2B6P58173 313 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 NARS2Q96I59 477 aaKnown RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SDR39U1Q9NRG7 319 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 PNPOQ9NVS9 261 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SMIM28A0A1B0GU29 152 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TLL1O43897 1013 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MPSTP25325 297 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 THOP1P52888 689 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CXCL9Q07325 125 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TPRG1LQ5T0D9 272 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 LRIF1Q5T3J3 769 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 PNCKQ6P2M8 343 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 AMIGO2Q86SJ2 522 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SDR16C5Q8N3Y7 309 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF548Q8NEK5 533 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 OR5B17Q8NGF7 314 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SIGLEC10Q96LC7 697 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TDRKHQ9Y2W6 561 aaKnown RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 LRRC37AA6NMS7 1700 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TEX51A0A1B0GUA7 166 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 A8MVJ9 347 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 EDN1P05305 212 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 GNAO1P09471 354 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 KLRK1P26718 216 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CLEC10AQ8IUN9 316 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 KBTBD2Q8IY47 623 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 PARP8Q8N3A8 854 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MINDY3Q9H8M7 445 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 A0A1W2PPM1 405 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MMP20O60882 483 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MT-ND5P03915 603 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 GBE1Q04446 702 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ARHGAP19Q14CB8 494 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 COLEC12Q5KU26 742 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ADGRF1Q5T601 910 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 CES3Q6UWW8 571 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 AARSD1Q9BTE6 412 aaKnown RBP8.61□□□□□ -1.03
COL6A5-202ENST00000312481 EXO5Q9H790 373 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 TMEM138Q9NPI0 162 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 RNF6Q9Y252 685 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 OARD1Q9Y530 152 aa8.61□□□□□ -1.03
COL6A5-202ENST00000312481 MN1Q10571 1320 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 NIPAL4Q0D2K0 466 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 TDGQ13569 410 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 SLC34A3Q8N130 599 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 LMO3Q8TAP4 145 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ANKRD49Q8WVL7 239 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 S100A16Q96FQ6 103 aaKnown RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 BHLHE41Q9C0J9 482 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 RYDENQ9NUL5 291 aaKnown RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF763Q0D2J5 394 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 FEM1AQ9BSK4 669 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 NUDT19A8MXV4 375 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 HTRA2O43464 458 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 NUDT1P36639 197 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ABATP80404 500 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms