RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CSRP3P50461 194 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 CBLBQ13191 982 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 ZC3H12BQ5HYM0 836 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 SPANXN3Q5MJ09 141 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 MLIPQ5VWP3 458 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 STEAP4Q687X5 459 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 TRMT10BQ6PF06 316 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 TTLL10Q6ZVT0 673 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 SYDE1Q6ZW31 735 aaPredicted RBP18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 PCGF5Q86SE9 256 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 GALNT7Q86SF2 657 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 MRGPREQ86SM8 312 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 ARHGEF39Q8N4T4 335 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 PPFIBP2Q8ND30 876 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 SMPDL3AQ92484 453 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 NDNQ99608 321 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 SPSB2Q99619 263 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 SELENOSQ9BQE4 189 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 DPH7Q9BTV6 452 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 NDC1Q9BTX1 674 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 ACAT2Q9BWD1 397 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 CUTCQ9NTM9 273 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 CNTRLQ7Z7A1 2325 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 PRRC2CQ9Y520 2896 aaKnown RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 A0A0J9YVX5 310 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 EIF3FO00303 357 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 DSCR3O14972 297 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 SRPX2O60687 465 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 SEC31AO94979 1220 aaKnown RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 TSPAN12O95859 305 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 IMPA1P29218 277 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 ELK3P41970 407 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 PNLIPRP1P54315 467 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 CDKN2DP55273 166 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 DR1Q01658 176 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 KLRB1Q12918 225 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 ZXDCQ2QGD7 858 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 TTLL9Q3SXZ7 439 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 BBS9Q3SYG4 887 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 TCTE1Q5JU00 501 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 TEDDM1Q5T9Z0 273 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 ASB18Q6ZVZ8 466 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 PPP1R32Q7Z5V6 425 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 PAQR7Q86WK9 346 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 CERS2Q96G23 380 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 C10orf90Q96M02 699 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 C17orf62Q9BQA9 187 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 PLCD4Q9BRC7 762 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 NAT9Q9BTE0 207 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 SLC26A1Q9H2B4 701 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 FAM114A2Q9NRY5 505 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 TXLNGQ9NUQ3 528 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 IFT80Q9P2H3 777 aaPredicted RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 ADAMTS6Q9UKP5 1117 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 PADI2Q9Y2J8 665 aa18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 PTRH2Q9Y3E5 179 aaKnown RBP18.96■□□□□ 0.63
PDZRN3-202ENST00000308537 CCL11P51671 97 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 PGGT1BP53609 377 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 ITGA8P53708 1063 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 ARSFP54793 590 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 VSX2P58304 361 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 SNRPNP63162 240 aaKnown RBP18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 PRDX1Q06830 199 aaKnown RBP18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 SSPNQ14714 243 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 GRM7Q14831 915 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 PRTGQ2VWP7 1150 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 WASHC2DQ5SRD0 308 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 YOD1Q5VVQ6 348 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 ICE2Q659A1 982 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 KIAA0408Q6ZU52 694 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 RAB42Q8N4Z0 105 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 TMEM102Q8N9M5 508 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 FDCSPQ8NFU4 85 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 FKBP10Q96AY3 582 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 NUDT9Q9BW91 350 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 CCDC68Q9H2F9 335 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 ACSS2Q9NR19 701 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 TAC3Q9UHF0 121 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 DOPEY2Q9Y3R5 2298 aa18.95■□□□□ 0.62
PDZRN3-202ENST00000308537 COL12A1Q99715 3063 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 E7ESA3 106 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 CCDC188H7C350 402 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 MASP2O00187 686 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 CARSP49589 748 aaKnown RBP18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 FOXK1P85037 733 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 FASTKD3Q14CZ7 662 aaKnown RBP18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 NKG7Q16617 165 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 HP1BP3Q5SSJ5 553 aaPredicted RBP18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 PAQR3Q6TCH7 311 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 MED25Q71SY5 747 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 OVCH1Q7RTY7 1134 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 EEF1AKMT1Q8WVE0 214 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 OR2A5Q96R48 311 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 ZFYVE21Q9BQ24 234 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 SLC25A23Q9BV35 468 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 CUEDC1Q9NWM3 386 aaPredicted RBP18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 IRAK4Q9NWZ3 460 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 ANKMY1Q9P2S6 941 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 CHMP2BQ9UQN3 213 aa18.94■□□□□ 0.62
PDZRN3-202ENST00000308537 VSTM2BA6NLU5 285 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms