RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PLIN3O60664 434 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MT-ND5P03915 603 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ATP6V1B1P15313 513 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MTHFRP42898 656 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PITPNBP48739 271 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PLIN5Q00G26 463 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PTSQ03393 145 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TMEM164Q5U3C3 297 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 NAPRTQ6XQN6 538 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 HSDL2Q6YN16 418 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RNF113BQ8IZP6 322 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 C4orf32Q8N8J7 132 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SUN3Q8TAQ9 357 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 AGAP11Q8TF27 550 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MCMBPQ9BTE3 642 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 APOL5Q9BWW9 433 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PRR5-ARHGAP8B1AHC4 643 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RP2O75695 350 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 JCHAINP01591 159 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MBL2P11226 248 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 MFSD10Q14728 455 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PIK3R6Q5UE93 754 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 KIAA0319Q5VV43 1072 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZBTB2Q8N680 514 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAM83CQ9BQN1 747 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GON7Q9BXV9 100 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 B3GAT2Q9NPZ5 323 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 KLHL1Q9NR64 748 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CCDC195A0A1B0GUA6 201 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 OR10H3O60404 316 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PDYNP01213 254 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LAMP2P13473 410 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 UGT1A4P22310 534 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 VSX2P58304 361 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 MAPK14Q16539 360 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SLC36A3Q495N2 470 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 NUDT13Q86X67 352 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 KCNE4Q8WWG9 221 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 AIFM3Q96NN9 605 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SDCBP2Q9H190 292 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CMTM6Q9NX76 183 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LAMP3Q9UQV4 416 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PCYT1BQ9Y5K3 369 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 PGRP06401 933 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ADH6P28332 368 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CASRP41180 1078 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 GRK6P43250 576 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LPCAT4Q643R3 524 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SPESP1Q6UW49 350 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ARHGAP36Q6ZRI8 547 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TSPAN33Q86UF1 283 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 NPAS4Q8IUM7 802 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 HASPINQ8TF76 798 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ELMOD3Q96FG2 381 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 JAM3Q9BX67 310 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 BTBD2Q9BX70 525 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 BHLHE41Q9C0J9 482 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 AGO1Q9UL18 857 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 PCDHB3Q9Y5E6 796 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TSC2P49815 1807 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 K7EPI3 171 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CBX4O00257 560 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 EEDO75530 441 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 NOL4O94818 638 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 WDPCPO95876 746 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 RPS3P23396 243 aaKnown RBP eCLIP3.92□□□□□ -1.78
USH2A-201ENST00000307340 THPOP40225 353 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 RPL22L1Q6P5R6 122 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 KCTD18Q6PI47 426 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 NAT14Q8WUY8 206 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 METTL21AQ8WXB1 218 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LRRC58Q96CX6 371 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CGREF1Q99674 301 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SYT3Q9BQG1 590 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 CD93Q9NPY3 652 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 C12orf4Q9NQ89 552 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 KLHL13Q9P2N7 655 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 MARCOQ9UEW3 520 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 SLCO3A1Q9UIG8 710 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 COL18A1P39060 1754 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 A0A1W2PQ45 241 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 A0A1W2PQY0 241 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 RASAL1O95294 804 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 MT-CO2P00403 227 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 IDSP22304 550 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PSMB9P28065 219 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ADORA2AP29274 412 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 LILRA4P59901 499 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PPP2R2BQ00005 443 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 ELAVL3Q14576 367 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 RSBN1Q5VWQ0 802 aaPredicted RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 CD300LGQ6UXG3 332 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 WDR48Q8TAF3 677 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 SNRNP27Q8WVK2 155 aaKnown RBP3.92□□□□□ -1.78
USH2A-201ENST00000307340 FIG4Q92562 907 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 HERPUD2Q9BSE4 406 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TOR4AQ9NXH8 423 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 PPT2Q9UMR5 302 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 HCN4Q9Y3Q4 1203 aa3.92□□□□□ -1.78
USH2A-201ENST00000307340 TCAF1Q9Y4C2 921 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms