RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 POLR2JP52435 117 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 RAD23AP54725 363 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 RPS14P62263 151 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 PLGLB1Q02325 96 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 SPIN4Q56A73 249 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 POMZP3Q6PJE2 187 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 FAM20CQ8IXL6 584 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 AADATQ8N5Z0 425 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 FBXO30Q8TB52 745 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM125Q96AQ2 219 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 DACH2Q96NX9 599 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 CMKLR1Q99788 373 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 HDAC8Q9BY41 377 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 ZDHHC5Q9C0B5 715 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 REXO4Q9GZR2 422 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 PLXNB2O15031 1838 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 GMFGO60234 142 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 SASH3O75995 380 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 PENKP01210 267 aaPredicted RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 HBQ1P09105 142 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 AK4P27144 223 aaPredicted RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 NCBP2P52298 156 aaKnown RBP eCLIP9□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF544Q6NX49 715 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 ACVR1CQ8NER5 493 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 RP9Q8TA86 221 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 GPR151Q8TDV0 419 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 NT5C3BQ969T7 300 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 MRPL48Q96GC5 212 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 RPRD1BQ9NQG5 326 aaKnown RBP9□□□□□ -0.97
PTPRE-202ENST00000306042 ATXN10Q9UBB4 475 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 TRPS1Q9UHF7 1281 aa9□□□□□ -0.97
PTPRE-202ENST00000306042 A0A0U1RQS6 177 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 LOC730098B7Z3J9 87 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TLR4O00206 839 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 POLR1CO15160 346 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 KLK1P06870 262 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 COX4I1P13073 169 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 FASP25445 335 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 GTF2A1P52655 376 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CTBSQ01459 385 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 RBPJQ06330 500 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 KDELC1Q6UW63 502 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM26Q6ZUK4 368 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ASPGQ86U10 573 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ST13P4Q8IZP2 240 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CPSF7Q8N684 471 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 DENND6BQ8NEG7 585 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 FCRL3Q96P31 734 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 BOCQ9BWV1 1114 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CD244Q9BZW8 370 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SPATA7Q9P0W8 599 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 LRIT1Q9P2V4 623 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ENOPH1Q9UHY7 261 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 KLF15Q9UIH9 416 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 MAP4K5Q9Y4K4 846 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 DNMT3AQ9Y6K1 912 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 MAP1BP46821 2468 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 FOXO6A8MYZ6 492 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 M0R3G1 203 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 MAP2K7O14733 419 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 GSNP06396 782 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 FBLP22087 321 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 GPX6P59796 221 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CXorf57Q6NSI4 855 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM135Q86UB9 458 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 C1orf52Q8N6N3 182 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 PNPT1Q8TCS8 783 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 WFDC5Q8TCV5 224 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 MIPOL1Q8TD10 442 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 UTP15Q8TED0 518 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 PTCD3Q96EY7 689 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 C5orf34Q96MH7 638 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 KCNS3Q9BQ31 491 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 BDH2Q9BUT1 245 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 MARK1Q9P0L2 795 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SEC14L3Q9UDX4 400 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 PRRT4C9JH25 899 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TCEA3O75764 348 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ITGA2P17301 1181 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 IL4RP24394 825 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ATP5A1P25705 553 aaKnown RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SMIM11AP58511 58 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 HMGCS1Q01581 520 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 MEF2AQ02078 507 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 GRM7Q14831 915 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SLC14A2Q15849 920 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 TCHHL1Q5QJ38 904 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 GOLGA7Q7Z5G4 137 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 CSNK1A1LQ8N752 337 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 BANPQ8N9N5 519 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 OR51B5Q9H339 312 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 REEP1Q9H902 201 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 SLC6A14Q9UN76 642 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 ENTPD2Q9Y5L3 495 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 FADS3Q9Y5Q0 445 aa8.99□□□□□ -0.97
PTPRE-202ENST00000306042 PSAT1Q9Y617 370 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms