RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CDKN1CP49918 316 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 RAB25P57735 213 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 RAB14P61106 215 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 SNRPD2P62316 118 aaKnown RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 NKG7Q16617 165 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF284Q2VY69 593 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 TIGD5Q53EQ6 642 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 C10orf62Q5T681 223 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 CPZQ66K79 652 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 RGL4Q8IZJ4 473 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 OR10G2Q8NGC3 310 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 FRMD6Q96NE9 622 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 IL4I1Q96RQ9 567 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ASPNQ9BXN1 380 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 TNKS2Q9H2K2 1166 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 TMEM245Q9H330 911 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MAGIXQ9H6Y5 334 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF639Q9UID6 485 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 LOC730098B7Z3J9 87 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 PLOD3O60568 738 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 PSIP1O75475 530 aaKnown RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 STK16O75716 305 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 TBX18O95935 607 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 RHOCP08134 193 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 IL7P13232 177 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 KCNE1P15382 129 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MASP1P48740 699 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 DAPP51397 102 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 RORCP51449 518 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 CXCR4P61073 352 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 IL10RBQ08334 325 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 KEAP1Q14145 624 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 SEMA3AQ14563 771 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 CCDC58Q4VC31 144 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ZNF648Q5T619 568 aaPredicted RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ERICH5Q6P6B1 374 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 CEP68Q76N32 757 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 LUZP2Q86TE4 346 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 FLCNQ8NFG4 579 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 SNX18Q96RF0 628 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MGLLQ99685 303 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ALOXE3Q9BYJ1 711 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 GRIP1Q9Y3R0 1128 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MICAL3Q7RTP6 2002 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MAGEB17A8MXT2 336 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 IRF1P10914 325 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 ITGAMP11215 1152 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MYL9P24844 172 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 KCNC4Q03721 635 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 DSC3Q14574 896 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 TRPM4Q8TD43 1214 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 MCMBPQ9BTE3 642 aa12.7□□□□□ -0.38
TRIM35-201ENST00000305364 FARSBQ9NSD9 589 aaKnown RBP12.7□□□□□ -0.38
TRIM35-201ENST00000305364 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
TRIM35-201ENST00000305364 C17orf102A2RUQ5 167 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 TREHO43280 583 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 CHI3L1P36222 383 aaPredicted RBP12.69□□□□□ -0.38
TRIM35-201ENST00000305364 UGT2B15P54855 530 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 HSPA14Q0VDF9 509 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 FAM217AQ8IXS0 508 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 TMEM203Q969S6 136 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 C1GALT1C1Q96EU7 318 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 CDCA5Q96FF9 252 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 DPH2Q9BQC3 489 aaPredicted RBP12.69□□□□□ -0.38
TRIM35-201ENST00000305364 DUSP21Q9H596 190 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 CARS2Q9HA77 564 aaKnown RBP12.69□□□□□ -0.38
TRIM35-201ENST00000305364 ARNT2Q9HBZ2 717 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 RAD18Q9NS91 495 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 PCDHB9Q9Y5E1 797 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 MEIOCA2RUB1 952 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 UPK1AO00322 258 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 GJB3O75712 270 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 CLDN9O95484 217 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 MMP3P08254 477 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 PTPN2P17706 415 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 MFSD10Q14728 455 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 YIPF6Q96EC8 236 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 FBXO44Q9H4M3 255 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 MS4A12Q9NXJ0 267 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 GPSM3Q9Y4H4 160 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 ADAMDEC1O15204 470 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 ESR1P03372 595 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 BCKDHAP12694 445 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 KDELR2P33947 212 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 LRRC26Q2I0M4 334 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 CARD16Q5EG05 197 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 FBXL22Q6P050 247 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
TRIM35-201ENST00000305364 MON1AQ86VX9 555 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 AMIGO1Q86WK6 493 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 INPP5KQ9BT40 448 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 CENPOQ9BU64 300 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 POLR2J2Q9GZM3 115 aaKnown RBP12.69□□□□□ -0.38
TRIM35-201ENST00000305364 SMURF1Q9HCE7 757 aa12.69□□□□□ -0.38
TRIM35-201ENST00000305364 RANGRFQ9HD47 186 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms