RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TEDDM1Q5T9Z0 273 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 STEAP4Q687X5 459 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 RNF44Q7L0R7 432 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 PIWIL4Q7Z3Z4 852 aaKnown RBP25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 ZNF480Q8WV37 535 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 PLAC1Q9HBJ0 212 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 CUTCQ9NTM9 273 aa25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 CORO1CQ9ULV4 474 aaPredicted RBP25.33■■□□□ 1.65
CDKN2A-201ENST00000304494 DSCR3O14972 297 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 CASQ1P31415 396 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 FOLR3P41439 243 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 VSX2P58304 361 aaPredicted RBP25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 SSPNQ14714 243 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 FAM69BQ5VUD6 431 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 MED25Q71SY5 747 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 PALM2Q8IXS6 379 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 IP6K3Q96PC2 410 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 ZFYVE21Q9BQ24 234 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC6A20Q9NP91 592 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 TAC3Q9UHF0 121 aa25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 PTRH2Q9Y3E5 179 aaKnown RBP25.32■■□□□ 1.64
CDKN2A-201ENST00000304494 TLN1Q9Y490 2541 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 A0A0J9YVX5 310 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 E7ENX8 843 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 DNAJB5O75953 348 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 C8GP07360 202 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 RPL21P46778 160 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 ABATP80404 500 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 TIAL1Q01085 375 aaKnown RBP eCLIP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 TAP2Q03519 686 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 PRDX1Q06830 199 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC9A5Q14940 896 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 WASHC2DQ5SRD0 308 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 ICE2Q659A1 982 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 CPZQ66K79 652 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 MRPL14Q6P1L8 145 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 MAATS1Q7Z4T9 603 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 MYO1HQ8N1T3 1032 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 TMEM102Q8N9M5 508 aaPredicted RBP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 OR2Y1Q8NGV0 311 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 MCOLN3Q8TDD5 553 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 EEF1AKMT1Q8WVE0 214 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 FKBP10Q96AY3 582 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 PLCD4Q9BRC7 762 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 WDR83Q9BRX9 315 aaKnown RBP25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 TRIM55Q9BYV6 548 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 SNX24Q9Y343 169 aa25.31■■□□□ 1.64
CDKN2A-201ENST00000304494 FAM187AA6NFU0 413 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 TP73O15350 636 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 ATXN8OSP0DMR3 200 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 RRADP55042 308 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 CDKN2DP55273 166 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 ETF1P62495 437 aaKnown RBP25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 PDIA2Q13087 525 aaKnown RBP25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 CHAF1BQ13112 559 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 SP140Q13342 867 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 RBM20Q5T481 1227 aaKnown RBP25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 FRMPD2BQ6IN97 320 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 ASB18Q6ZVZ8 466 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 ANKMY2Q8IV38 441 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 PPFIBP2Q8ND30 876 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 SPATA4Q8NEY3 305 aa25.3■■□□□ 1.64
CDKN2A-201ENST00000304494 ONECUT2O95948 504 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 OTX2P32243 289 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 CCL11P51671 97 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 YBX1P67809 324 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 KLRB1Q12918 225 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 CALCOCO2Q13137 446 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 PDAP1Q13442 181 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 THEMIS2Q5TEJ8 643 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 FAM45BPQ6NSW5 357 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 TRMT10BQ6PF06 316 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 PAQR3Q6TCH7 311 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 SPNS2Q8IVW8 549 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 GPATCH11Q8N954 259 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 FAM45AQ8TCE6 357 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 PTERQ96BW5 349 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 CCDC138Q96M89 665 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 ZFATQ9P243 1243 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC17A6Q9P2U8 582 aa25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 G3BP2Q9UN86 482 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 PCDHGA9Q9Y5G4 932 aaKnown RBP25.29■■□□□ 1.64
CDKN2A-201ENST00000304494 HELZ2Q9BYK8 2649 aaKnown RBP25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 HYKKA2RU49 373 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 E7ESA3 106 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC16A5O15375 505 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 NRP2O60462 931 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 IGHEP01854 428 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 ALBP02768 609 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 EZRP15311 586 aaKnown RBP25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 IMPA1P29218 277 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 IL2P60568 153 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 CBLBQ13191 982 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 FBXO42Q6P3S6 717 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 OVCH1Q7RTY7 1134 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 PAQR7Q86WK9 346 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 FBXO36Q8NEA4 188 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 LINGO1Q96FE5 620 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 ERP44Q9BS26 406 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC25A23Q9BV35 468 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms