RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CLDN24A6NM45 220 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 WASHC1A8K0Z3 465 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 GPC1P35052 558 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 FAM171A1Q5VUB5 890 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 FRMPD2BQ6IN97 320 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 OR10T2Q8NGX3 314 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 HERVK_113Q902F9 699 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 UBXN10Q96LJ8 280 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 SMIM14Q96QK8 99 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 MED10Q9BTT4 135 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 DYRK4Q9NR20 520 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 ZMAT5Q9UDW3 170 aaKnown RBP14.04□□□□□ -0.16
CDT1-201ENST00000301019 KCNE2Q9Y6J6 123 aa14.04□□□□□ -0.16
CDT1-201ENST00000301019 FAM240BA0A1B0GVZ2 78 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 KELP23276 732 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 IGFBP6P24592 240 aaPredicted RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 RYKP34925 604 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 DSTNP60981 165 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SCN1BQ07699 218 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 CACNB2Q08289 660 aaPredicted RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 PWP1Q13610 501 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 AP5B1Q2VPB7 878 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 CPZQ66K79 652 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 CCDC190Q86UF4 302 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 METTL23Q86XA0 190 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 C2CD4AQ8NCU7 369 aaPredicted RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 ATP6V1C2Q8NEY4 427 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 WDR36Q8NI36 951 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 APH1BQ8WW43 257 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 GGHQ92820 318 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SLC22A4Q9H015 551 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 FARSBQ9NSD9 589 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 NSMCE4AQ9NXX6 385 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 OR12D3Q9UGF7 316 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 PPP2R3BQ9Y5P8 575 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 GPX5O75715 221 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SERPINF2P08697 491 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 ADRA2AP08913 450 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 MATKP42679 507 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 HUNKP57058 714 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SRP54P61011 504 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 ANKRD54Q6NXT1 300 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 MSANTD2Q6P1R3 559 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 PAQR3Q6TCH7 311 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 ZPBP2Q6X784 338 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 ASB18Q6ZVZ8 466 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SLC46A3Q7Z3Q1 461 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SLC34A3Q8N130 599 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 KIAA1958Q8N8K9 716 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 SLC37A3Q8NCC5 494 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 PJA1Q8NG27 643 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 IL4I1Q96RQ9 567 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 ATPIF1Q9UII2 106 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 MGAT4AQ9UM21 535 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 TIMM13Q9Y5L4 95 aaPredicted RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 RBBP6Q7Z6E9 1792 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 TRAV6A0A075B6T7 132 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 DPYSL4O14531 572 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 DCLK1O15075 740 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 MTHFD2P13995 350 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 HOXA9P31269 272 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 GKP32189 559 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 CCR1P32246 355 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 ERVFC1P60507 584 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 VLDLRP98155 873 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 GALNT3Q14435 633 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 B3GLCTQ6Y288 498 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 NIPA1Q7RTP0 329 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 VN1R5Q7Z5H4 357 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 BCDIN3DQ7Z5W3 292 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 RASAL3Q86YV0 1011 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 CRISPLD1Q9H336 500 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 ZNF556Q9HAH1 456 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 MPP6Q9NZW5 540 aa14.03□□□□□ -0.16
CDT1-201ENST00000301019 CCDC59Q9P031 241 aaKnown RBP14.03□□□□□ -0.16
CDT1-201ENST00000301019 SHOXO15266 292 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 ALDH1A1P00352 501 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 PIGRP01833 764 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 OPN1SWP03999 348 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 USP17L7P0C7H9 530 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 INPP1P49441 399 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 GNA13Q14344 377 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 WSCD2Q2TBF2 565 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 DLK2Q6UY11 383 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 WACQ9BTA9 647 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 SLC25A37Q9NYZ2 338 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 NUP50Q9UKX7 468 aa14.02□□□□□ -0.16
CDT1-201ENST00000301019 STX7O15400 261 aaKnown RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 ADRA1BP35368 520 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 FEN1P39748 380 aaKnown RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 MCCD1P59942 119 aaPredicted RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 RAB8AP61006 207 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 RUNX1T1Q06455 604 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 GPR19Q15760 415 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 IER5Q5VY09 327 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 KANK2Q63ZY3 851 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ZNF57Q68EA5 555 aaPredicted RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 DNAJC5GQ8N7S2 189 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms