RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OR2AG2A6NM03 316 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 FAM220BPB1ANY3 271 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CFAP99D6REC4 459 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 XPNPEP2O43895 674 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 NOL3O60936 208 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ABCB7O75027 752 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 XYLBO75191 536 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 HPRP00739 348 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 FSHRP23945 695 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CSNK1DP48730 415 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 PLA2G16P53816 162 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CHIT1Q13231 466 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 RGS21Q2M5E4 152 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 SMU1Q2TAY7 513 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CARD16Q5EG05 197 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ADNP2Q6IQ32 1131 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CYP2U1Q7Z449 544 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 IGFN1Q86VF2 1251 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CHCHD4Q8N4Q1 142 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 PYURFQ96I23 114 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CCDC138Q96M89 665 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 LYSMD1Q96S90 227 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 RMI1Q9H9A7 625 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ASIC5Q9NY37 505 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 TMEFF2Q9UIK5 374 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 MYO1GB0I1T2 1018 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 hCG_2039718K7EN88 272 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 LEFTY2O00292 366 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 AXIN1O15169 862 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 SEC14L2O76054 403 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 FTH1P02794 183 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 RETP07949 1114 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 NAT1P18440 290 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 HOXD12P35452 270 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 SPINT3P49223 89 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 SIM2Q14190 667 aaPredicted RBP12.52□□□□□ -0.4
HIF3A-204ENST00000300862 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.4
HIF3A-204ENST00000300862 DPY19L1Q2PZI1 675 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 LRIF1Q5T3J3 769 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 NOXRED1Q6NXP6 359 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 CEP68Q76N32 757 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 VTCN1Q7Z7D3 282 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 DCP2Q8IU60 420 aaKnown RBP12.52□□□□□ -0.4
HIF3A-204ENST00000300862 ZDHHC21Q8IVQ6 265 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 CHPFQ8IZ52 775 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 ZCCHC7Q8N3Z6 543 aaKnown RBP12.52□□□□□ -0.4
HIF3A-204ENST00000300862 ARL10Q8N8L6 244 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 PJA1Q8NG27 643 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 ECHDC3Q96DC8 303 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 VWCEQ96DN2 955 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 TUBA1CQ9BQE3 449 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.4
HIF3A-204ENST00000300862 REXO4Q9GZR2 422 aaKnown RBP12.52□□□□□ -0.4
HIF3A-204ENST00000300862 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 TMEM247A6NEH6 219 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 TGM5O43548 720 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CPSF4O95639 269 aaKnown RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CBSLP0DN79 551 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 AMD1P17707 334 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CD22P20273 847 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CBSP35520 551 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 TLE2Q04725 743 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 ABRQ12979 859 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 RBM48Q5RL73 367 aaKnown RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 LDLRAP1Q5SW96 308 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 FRG2Q64ET8 278 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 LRRC70Q7Z2Q7 622 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 BTLAQ7Z6A9 289 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CYP4Z1Q86W10 505 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CLECL1Q8IZS7 167 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 SVOPLQ8N434 492 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 LILRA3Q8N6C8 439 aaPredicted RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 OR5K1Q8NHB7 308 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 SORCS1Q8WY21 1168 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 ELMO1Q92556 727 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 HDAC2Q92769 488 aaKnown RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CNDP2Q96KP4 475 aaKnown RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 FRG2BQ96QU4 278 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 PANX1Q96RD7 426 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 ARPC5LQ9BPX5 153 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 CORO1BQ9BR76 489 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 RMND5AQ9H871 391 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 THG1LQ9NWX6 298 aaKnown RBP12.52□□□□□ -0.41
HIF3A-204ENST00000300862 DGKBQ9Y6T7 804 aa12.52□□□□□ -0.41
HIF3A-204ENST00000300862 PABPN1LA6NDY0 278 aaKnown RBP12.51□□□□□ -0.41
HIF3A-204ENST00000300862 NEDD8-MDP1E9PL57 170 aa12.51□□□□□ -0.41
HIF3A-204ENST00000300862 YY2O15391 372 aa12.51□□□□□ -0.41
HIF3A-204ENST00000300862 INMTO95050 263 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms