RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DNAJB7Q7Z6W7 309 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TLCD1Q96CP7 247 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CLDND1Q9NY35 253 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UTS2RQ9UKP6 389 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR14I1A6ND48 311 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GLOD5A6NK44 160 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 B4GALT2O60909 372 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRKACGP22612 351 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CXCR1P25024 350 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MEF2AQ02078 507 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TNFAIP8L3Q5GJ75 292 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SUSD1Q6UWL2 747 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HSDL2Q6YN16 418 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ABHD13Q7L211 337 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CCDC36Q8IYA8 594 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DCAKDQ8WVC6 231 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SUV39H2Q9H5I1 410 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CALML5Q9NZT1 146 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ARPC2O15144 300 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 REM1O75628 298 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLC7A1P30825 629 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CSTF2P33240 577 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 EIF2S3P41091 472 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DSTNP60981 165 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NPTX1Q15818 432 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OVCA2Q8WZ82 227 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MIPEPQ99797 713 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CNTN3Q9P232 1028 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TLL2Q9Y6L7 1015 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TTC34A8MYJ7 566 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TLR4O00206 839 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TRAPPC6AO75865 159 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MPIP34949 423 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CD47Q08722 323 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TSTQ16762 297 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ANKFN1Q8N957 763 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 THEM6Q8WUY1 208 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LRRC58Q96CX6 371 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TBL1XR1Q9BZK7 514 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 POLMQ9NP87 494 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 IL1RAPQ9NPH3 570 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DNAJB9Q9UBS3 223 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KCNK6Q9Y257 313 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OAZ2O95190 189 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CYB5AP00167 134 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HLA-EP13747 358 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CCNFP41002 786 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NR0B1P51843 470 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 EIPR1Q53HC9 387 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MBLAC2Q68D91 279 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ARL9Q6T311 187 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZDHHC24Q6UX98 284 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LGI4Q8N135 537 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 YIPF7Q8N8F6 280 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 DTX3Q8N9I9 347 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TWNKQ96RR1 684 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KAT8Q9H7Z6 458 aaKnown RBP13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 BAIAP2Q9UQB8 552 aa13.25□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AKAP8O43823 692 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GRK5P34947 590 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR2B6P58173 313 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 S100A10P60903 97 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HNRNPDQ14103 355 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RBM48Q5RL73 367 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRAMEF14Q5SWL7 426 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PRAMEF13Q5VWM6 474 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 QSOX2Q6ZRP7 698 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GOLGA7Q7Z5G4 137 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SNX29P2Q8IUI4 249 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CMTR2Q8IYT2 770 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KLHL36Q8N4N3 616 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TMBIM1Q969X1 311 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 IGSF9Q9P2J2 1179 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RPL26L1Q9UNX3 145 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FARSAQ9Y285 508 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 WNT6Q9Y6F9 365 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 A8MT66 165 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF878C9JN71 531 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GATBO75879 557 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ADH5P11766 374 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF3P17036 446 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KCNJ5P48544 419 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 UAP1L1Q3KQV9 507 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF611Q8N823 705 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF548Q8NEK5 533 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PPP1R14BQ96C90 147 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TAS2R7Q9NYW3 318 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GALPQ9UBC7 116 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF726A6NNF4 738 aa13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 XRCC1P18887 633 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FSHRP23945 695 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms