RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
CDH8-201ENST00000299345 MBD1Q9UIS9 605 aaPredicted RBP13.22□□□□□ -0.29
CDH8-201ENST00000299345 RPS6KA6Q9UK32 745 aa13.22□□□□□ -0.29
CDH8-201ENST00000299345 MAGEB17A8MXT2 336 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 RFPL2O75678 378 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 CCNDBP1O95273 360 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 PTPN2P17706 415 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 SHMT2P34897 504 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 VEGFBP49765 207 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 RPS6KA3P51812 740 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 RBM48Q5RL73 367 aaKnown RBP13.21□□□□□ -0.29
CDH8-201ENST00000299345 ASTLQ6HA08 431 aaPredicted RBP13.21□□□□□ -0.29
CDH8-201ENST00000299345 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 L3MBTL4Q8NA19 623 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 MTG2Q9H4K7 406 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 CARS2Q9HA77 564 aaKnown RBP13.21□□□□□ -0.29
CDH8-201ENST00000299345 SLC6A13Q9NSD5 602 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 UTS2RQ9UKP6 389 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 ERVW-1Q9UQF0 538 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 KCNE2Q9Y6J6 123 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 SCN5AQ14524 2016 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 TTC34A8MYJ7 566 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 TSPAN6O43657 245 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 AP2A2O94973 939 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 B3GALT4O96024 378 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 AMD1P17707 334 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 DCTP40126 519 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 TRPC1P48995 793 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 GALK1P51570 392 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 PHC1P78364 1004 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 DMC1Q14565 340 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 STARD3Q14849 445 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 NKG7Q16617 165 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 LIPJQ5W064 366 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 ATG16L2Q8NAA4 619 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 ZNF420Q8TAQ5 688 aaPredicted RBP13.21□□□□□ -0.29
CDH8-201ENST00000299345 STARD8Q92502 1023 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 TPD52L3Q96J77 140 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 PPIL1Q9Y3C6 166 aa13.21□□□□□ -0.29
CDH8-201ENST00000299345 A0A1W2PPW3 197 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 ABCB1P08183 1280 aaPredicted RBP13.21□□□□□ -0.3
CDH8-201ENST00000299345 EPORP19235 508 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 CCNA2P20248 432 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 IGFBP5P24593 272 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 CDKN2CP42773 168 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 SLC6A12P48065 614 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 TMEM220Q6QAJ8 160 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 USP51Q70EK9 711 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 TESCQ96BS2 214 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 MAGIXQ9H6Y5 334 aa13.21□□□□□ -0.3
CDH8-201ENST00000299345 MYO7AQ13402 2215 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 IGLV3-16A0A075B6K0 115 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 LOC100130705A0A1B0GUX0 176 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 hCG_2039718K7EN88 272 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 UPK1AO00322 258 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 TOP3AQ13472 1001 aaPredicted RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 DOC2AQ14183 400 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 SIM2Q14190 667 aaPredicted RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 CPTPQ5TA50 214 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 TRAPPC5Q8IUR0 188 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 EZH1Q92800 747 aaPredicted RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 PPT2Q9UMR5 302 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 PCDHGA8Q9Y5G5 932 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 CYP4B1P13584 511 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 HNF4AP41235 474 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 RANBP1P43487 201 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 LDLRAP1Q5SW96 308 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 C6orf141Q5SZD1 244 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 ANKRD26P1Q6NSI1 321 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 ERICH5Q6P6B1 374 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 ZBTB46Q86UZ6 589 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 TRAM1L1Q8N609 369 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 FBXL8Q96CD0 374 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 EXD2Q9NVH0 621 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 THG1LQ9NWX6 298 aaKnown RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 H3BM21 787 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 GFYI3L273 518 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 BCKDKO14874 412 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 BCL10O95999 233 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 CCR2P41597 374 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 BDKRB1P46663 353 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 STT3AP46977 705 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 KCNC3Q14003 757 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 LRIF1Q5T3J3 769 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 C1orf52Q8N6N3 182 aaKnown RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 SETD9Q8NE22 299 aa13.2□□□□□ -0.3
CDH8-201ENST00000299345 HDAC2Q92769 488 aaKnown RBP13.2□□□□□ -0.3
CDH8-201ENST00000299345 DUSP26Q9BV47 211 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms