RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TBC1D21Q8IYX1 336 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 FBXO15Q8NCQ5 510 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 FAM46AQ96IP4 442 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 FERD3LQ96RJ6 166 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 ATOH8Q96SQ7 321 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 PKP4Q99569 1192 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 CDC6Q99741 560 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 NUDT22Q9BRQ3 303 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 RTKNQ9BST9 563 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 TRIT1Q9H3H1 467 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 C12orf65Q9H3J6 166 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 TFB2MQ9H5Q4 396 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 MVB12BQ9H7P6 319 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 PCMTD2Q9NV79 361 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 SPHK1Q9NYA1 384 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 TXNDC16Q9P2K2 825 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 EMCNQ9ULC0 261 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 SH2B3Q9UQQ2 575 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 ASF1AQ9Y294 204 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 ASB1Q9Y576 335 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 LAMA5O15230 3695 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 MN1Q10571 1320 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 NUP210LQ5VU65 1888 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 MAP1BP46821 2468 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 A0A087X1B8 175 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 UQCRHLA0A096LP55 91 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TLDC2A0PJX2 215 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 PMS2P1A4D2B8 440 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 OR6C74A6NCV1 312 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 OR5K3A6NET4 321 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 LRRC14BA6NHZ5 514 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 RHPN2P1A8MT19 583 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TARM1B6A8C7 271 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 D6RAR5 112 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 IFRD1O00458 451 aaPredicted RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 KIF1CO43896 1103 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 NRP2O60462 931 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 CDH16O75309 829 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 ERLIN1O75477 346 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 RFPL3O75679 317 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 KRT38O76015 456 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 KLHL2O95198 593 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 PROCP04070 461 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 RPLP0P05388 317 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 PROS1P07225 676 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 GP1BAP07359 652 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 C8GP07360 202 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 UQCRHP07919 91 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 LTA4HP09960 611 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 MTHFD2P13995 350 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TFEBP19484 476 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 CNTFP26441 200 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 CRABP2P29373 138 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TYK2P29597 1187 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 ALDH4A1P30038 563 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 GPR3P46089 330 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 CAPZBP47756 277 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 GLRBP48167 497 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 RGS4P49798 205 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 KPNA2P52292 529 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 SIM1P81133 766 aaPredicted RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 SLC18A2Q05940 514 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 ILF2Q12905 390 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 SP140Q13342 867 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 SQSTM1Q13501 440 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 CASP8Q14790 479 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 CYP2A13Q16696 494 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TTLL9Q3SXZ7 439 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 AMZ1Q400G9 498 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 MAP9Q49MG5 647 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 FBXO48Q5FWF7 155 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TECRLQ5HYJ1 363 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 ANKRD34AQ69YU3 496 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 DHRS13Q6UX07 377 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 LRIG3Q6UXM1 1119 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 UBE2R2Q712K3 238 aaPredicted RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 TRIM73Q86UV7 250 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TAX1BP1Q86VP1 789 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 SLITRK4Q8IW52 837 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TRIM48Q8IWZ4 208 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TRIM42Q8IWZ5 723 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 FAM20CQ8IXL6 584 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 RBM12BQ8IXT5 1001 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 MYO1HQ8N1T3 1032 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 NKAPQ8N5F7 415 aaKnown RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 C2orf73Q8N5S3 287 aaPredicted RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 PPFIBP2Q8ND30 876 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 OR4E2Q8NGC2 313 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 OR9A1PQ8NGU1 263 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 ZNF480Q8WV37 535 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 SKA2Q8WVK7 121 aaPredicted RBP5.7□□□□□ -1.5
SSX3-201ENST00000298396 ZFPM2Q8WW38 1151 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 LCN9Q8WX39 176 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 ANKRD7Q92527 254 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 NAT6Q93015 286 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 KIAA1191Q96A73 305 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TSPAN17Q96FV3 270 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 MEGF10Q96KG7 1140 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TMEM74Q96NL1 305 aa5.7□□□□□ -1.5
SSX3-201ENST00000298396 TMEM79Q9BSE2 394 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms