RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TDGQ13569 410 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 NPTX1Q15818 432 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 COLEC12Q5KU26 742 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 CXorf57Q6NSI4 855 aaKnown RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRR23CQ6ZRP0 262 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 TPGS1Q6ZTW0 290 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLEC20AQ6ZU45 233 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 HID1Q8IV36 788 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZDHHC14Q8IZN3 488 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZBTB2Q8N680 514 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 DRAXINQ8NBI3 349 aaPredicted RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 XAGE5Q8WWM1 108 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 CRELD1Q96HD1 420 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZFYVE1Q9HBF4 777 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 SNTG1Q9NSN8 517 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 TDP1Q9NUW8 608 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 GMIPQ9P107 970 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ASF1AQ9Y294 204 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 TESMINQ9Y4I5 508 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 H0Y858 1186 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ACSL4O60488 711 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRAMEF1O95521 474 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 ADH1CP00326 375 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC35G4P0C7Q5 338 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 GDF10P55107 478 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 DCDC1P59894 354 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 NTHL1P78549 312 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 GTF2H2Q13888 395 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 GTF2H2CQ6P1K8 395 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 HSPBAP1Q96EW2 488 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 KCNS3Q9BQ31 491 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 AIF1LQ9BQI0 150 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 POLR2J2Q9GZM3 115 aaKnown RBP11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAT2BQ9NZL9 334 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 MLXQ9UH92 298 aa11.56□□□□□ -0.56
SYNGAP1-201ENST00000293748 hCG_2039718K7EN88 272 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 TP73O15350 636 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ERN1O75460 977 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC25A12O75746 678 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ESR1P03372 595 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 LAMP2P13473 410 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 IL9P15248 144 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ITPKAP23677 461 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 HSPA7P48741 367 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RPS14P62263 151 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 C2orf80Q0P641 193 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 C9orf64Q5T6V5 341 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ADGRG2Q8IZP9 1017 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 MCMBPQ9BTE3 642 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 C12orf4Q9NQ89 552 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 NDOR1Q9UHB4 597 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 MKLN1Q9UL63 735 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 SCML2Q9UQR0 700 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RIIAD1A6NNX1 92 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAN2B1O00754 1011 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 IFNA16P05015 189 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ACADLP28330 430 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 CCR10P46092 362 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 CDH15P55291 814 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RGS8P57771 180 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 PITPNAQ00169 270 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 HNRNPDQ14103 355 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 FAM174BQ3ZCQ3 159 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RNASE12Q5GAN4 147 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RSPO2Q6UXX9 243 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 STON2Q8WXE9 905 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 C12orf43Q96C57 262 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 SIPA1Q96FS4 1042 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 NECTIN3Q9NQS3 549 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 OBP2AQ9NY56 170 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLEC4AQ9UMR7 237 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 PCDHGA4Q9Y5G9 962 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRRC2BQ5JSZ5 2229 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 A0A0G2JPF8 293 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 GLYATL1P3A0A0U1RQE8 302 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 HNRNPCL3B7ZW38 293 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 GSTT2BP0CG30 244 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 HNRNPCL4P0DMR1 293 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 GDI1P31150 447 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAZP56270 477 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 VBP1P61758 197 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 SLC18A2Q05940 514 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 LARS2Q15031 903 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 OR8H3Q8N146 312 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 LIX1Q8N485 282 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 MSLNLQ96KJ4 702 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 TRNT1Q96Q11 434 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 TRIM2Q9C040 744 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 SMURF2Q9HAU4 748 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 FKBP14Q9NWM8 211 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 FBXO10Q9UK96 956 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms