RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 IRS2Q9Y4H2 1338 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-201ENST00000293441 TCRBV21S2A2A0A5A6 115 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 DPY19L1Q2PZI1 675 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 PHF12Q96QT6 1004 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CREBZFQ9NS37 354 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CXorf49A8MYA2 514 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-201ENST00000293441 FRG2Q64ET8 278 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 RASGEF1AQ8N9B8 481 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 FRG2BQ96QU4 278 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF879B4DU55 563 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CNTN5O94779 1100 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 ITPRIPL2Q3MIP1 535 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 TRPV1Q8NER1 839 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CYP8B1Q9UNU6 501 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 PMM2O15305 246 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 ITM2AO43736 263 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 BCHEP06276 602 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 MTHFD1P11586 935 aaKnown RBP16.86■□□□□ 0.29
SHANK1-201ENST00000293441 ARRB1P49407 418 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-201ENST00000293441 TXNL4AP83876 142 aaKnown RBP16.86■□□□□ 0.29
SHANK1-201ENST00000293441 SP140Q13342 867 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 WDR45BQ5MNZ6 344 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 ALG1LQ6GMV1 187 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 OR2L3Q8NG85 312 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 DCAKDQ8WVC6 231 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 FBXL18Q96ME1 805 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 FEM1AQ9BSK4 669 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 TCF7L1Q9HCS4 588 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 C8orf89P0DMQ9 161 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 MLLT6P55198 1093 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-201ENST00000293441 GMFBP60983 142 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CHAF1BQ13112 559 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 OR4F3Q6IEY1 312 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 GPR153Q6NV75 609 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 AMIGO1Q86WK6 493 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 OR4K17Q8NGC6 315 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 SLC2A4RGQ9NR83 387 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 KCTD3Q9Y597 815 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 A0A0D9SEW6 157 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 LDB2O43679 373 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 DHFRP00374 187 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 FAM163BP0C2L3 166 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CREB1P16220 341 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 SLC6A9P48067 706 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 VBP1P61758 197 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 OVCA2Q8WZ82 227 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 RAD9AQ99638 391 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 EBF4Q9BQW3 602 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM248Q9NWD8 314 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 ATXN10Q9UBB4 475 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
SHANK1-201ENST00000293441 DAPL1A0PJW8 107 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 PDHA2P29803 388 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CYP27C1Q4G0S4 372 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 GOLGA7Q7Z5G4 137 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM126BQ8IUX1 230 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 MAPK15Q8TD08 544 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 SMPDL3AQ92484 453 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 HTRA1Q92743 480 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 AKTIPQ9H8T0 292 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 FAM240BA0A1B0GVZ2 78 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CBFBQ13951 182 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 SUSD1Q6UWL2 747 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 CLDN19Q8N6F1 224 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 IGSF21Q96ID5 467 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 SGIP1Q9BQI5 828 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 TRIM39Q9HCM9 518 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 OXSMQ9NWU1 459 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 MOCS1Q9NZB8 636 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 COMMD3-BMI1R4GMX3 469 aa16.86■□□□□ 0.29
SHANK1-201ENST00000293441 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 GBAP04062 536 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 PCSK2P16519 638 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 SLC25A11Q02978 314 aaKnown RBP16.85■□□□□ 0.29
SHANK1-201ENST00000293441 DCAF12L1Q5VU92 463 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 KLHDC7BQ96G42 594 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 TLL2Q9Y6L7 1015 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 A8MT66 165 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 LOC730098B7Z3J9 87 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 COCHO43405 550 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 COQ9O75208 318 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 GALTP07902 379 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 RAP2AP10114 183 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 CSF2RAP15509 400 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 RASGEF1BQ0VAM2 473 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 BNIP1Q12981 228 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 C5orf22Q49AR2 442 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 METTL27Q8N6F8 245 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-201ENST00000293441 UFD1Q92890 307 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 ELAC1Q9H777 363 aaKnown RBP16.85■□□□□ 0.29
SHANK1-201ENST00000293441 BRD7Q9NPI1 651 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 RIMKLBQ9ULI2 386 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 RHOP08100 348 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 GDF5P43026 501 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 GDI2P50395 445 aaKnown RBP16.85■□□□□ 0.29
SHANK1-201ENST00000293441 ABATP80404 500 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 TSC22D1Q15714 1073 aa16.85■□□□□ 0.29
SHANK1-201ENST00000293441 BADQ92934 168 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms