RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 MTTPP55157 894 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 SCAPQ12770 1279 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 RHEBL1Q8TAI7 183 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 PYURFQ96I23 114 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 LOC730098B7Z3J9 87 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 HCN1O60741 890 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 FPR1P21462 350 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 VBP1P61758 197 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 TUBA4AP68366 448 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 SLC13A2Q13183 592 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 CNPY1Q3B7I2 92 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 MINDY4Q4G0A6 757 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 OR4F3Q6IEY1 312 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 SLC30A6Q6NXT4 461 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 PIM3Q86V86 326 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 LGI4Q8N135 537 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 GPR151Q8TDV0 419 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 TMBIM1Q969X1 311 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 IFT27Q9BW83 186 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 OAZ3Q9UMX2 235 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 EME2A4GXA9 379 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 TMEM150CB9EJG8 249 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ACADLP28330 430 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 DSC3Q14574 896 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ZFP69Q49AA0 526 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 EFHD2Q96C19 240 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 IMP4Q96G21 291 aaKnown RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF382Q96SR6 550 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 CNPPD1Q9BV87 410 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 PRRG4Q9BZD6 226 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ANKRA2Q9H9E1 313 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 SLC35C2Q9NQQ7 365 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 UPB1Q9UBR1 384 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 MAFFQ9ULX9 164 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 IGKV6D-21A0A0A0MT36 114 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 EFCAB9A8MZ26 197 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 KMOO15229 486 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 PRKD3O94806 890 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 GSTT2BP0CG30 244 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 FGF3P11487 239 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 E2F2Q14209 437 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 LRRC66Q68CR7 880 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ZBTB46Q86UZ6 589 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 CCDC36Q8IYA8 594 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 KLHL36Q8N4N3 616 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF433Q8N7K0 673 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 AURKBQ96GD4 344 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 RDH12Q96NR8 316 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 COQ9O75208 318 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 LATS1O95835 1130 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 DLDP09622 509 aaKnown RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 POU2F1P14859 743 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 PROZP22891 400 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 ZDHHC14Q8IZN3 488 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 HTRA1Q92743 480 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 ADAMTS10Q9H324 1103 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 CFL2Q9Y281 166 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 RSL1D1O76021 490 aaKnown RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TGFB1P01137 390 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 CLDN10P78369 228 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TGFBIQ15582 683 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TIGD6Q17RP2 521 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF776Q68DI1 518 aaPredicted RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 IGDCC3Q8IVU1 814 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 PYCR2Q96C36 320 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 GPER1Q99527 375 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 MGME1Q9BQP7 344 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TCHHQ07283 1943 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TTC24A2A3L6 582 aaPredicted RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TMEM233B4DJY2 109 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 RENP00797 406 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 ACTR1BP42025 376 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 ACTR1AP61163 376 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 UFM1P61960 85 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 PPP3R1P63098 170 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 CRTC2Q53ET0 693 aaPredicted RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 CRB2Q5IJ48 1285 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 SLC5A11Q8WWX8 675 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 LRIG1Q96JA1 1093 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 TRNT1Q96Q11 434 aaKnown RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 CARS2Q9HA77 564 aaKnown RBP12.46□□□□□ -0.41
PTCD1-201ENST00000292478 EURLQ9NYK6 297 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 LRRC42Q9Y546 428 aa12.46□□□□□ -0.41
PTCD1-201ENST00000292478 A0A1W2PQ45 241 aaPredicted RBP12.46□□□□□ -0.42
PTCD1-201ENST00000292478 A0A1W2PQY0 241 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 TLR4O00206 839 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 TFECO14948 347 aaPredicted RBP12.46□□□□□ -0.42
PTCD1-201ENST00000292478 TNFP01375 233 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms