RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PAMR1Q6UXH9 720 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 IQCHQ86VS3 1027 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 LGI4Q8N135 537 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 WACQ9BTA9 647 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 DUSP26Q9BV47 211 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 GTPBP2Q9BX10 602 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 LIN28AQ9H9Z2 209 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PCDHGB7Q9Y5F8 929 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 TAF1P21675 1872 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 MYH13Q9UKX3 1938 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 OR1F1O43749 312 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 INMTO95050 263 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 HMGN1P05114 100 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 GJB1P08034 283 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CHRNB1P11230 501 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 GRM5P41594 1212 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 NUDT6P53370 316 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PPP1R8Q12972 351 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 IKBKEQ14164 716 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CLEC12AQ5QGZ9 265 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 TSTD2Q5T7W7 516 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PACRGLQ8N7B6 248 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 NAT16Q8N8M0 369 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 LRRC57Q8N9N7 239 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 SGCDQ92629 289 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PMEPA1Q969W9 287 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CASZ1Q86V15 1759 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 K7EPI3 171 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CD48P09326 243 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PRKACAP17612 351 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 HSD3B2P26439 372 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PDX1P52945 283 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 S100A10P60903 97 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 ALG10Q5BKT4 473 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 TRMT10BQ6PF06 316 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 HAGHLQ6PII5 290 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 XKRXQ6PP77 449 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 TMED4Q7Z7H5 227 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 GALNT7Q86SF2 657 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 FAM124AQ86V42 546 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 SNX29P2Q8IUI4 249 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 ASB9Q96DX5 294 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 KCNC2Q96PR1 638 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 ITPAQ9BY32 194 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC25A51Q9H1U9 297 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 BRD7Q9NPI1 651 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 ZNF282Q9UDV7 671 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 SALL4Q9UJQ4 1053 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PCDHGA11Q9Y5H2 935 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 A0A1W2PQH9 124 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 SCGB1D2O95969 90 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 MT-CYBP00156 380 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CD72P21854 359 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 WDR4P57081 412 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 EEFSECP57772 596 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 YBEYP58557 167 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 TAF10Q12962 218 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 RHEBQ15382 184 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 UAP1L1Q3KQV9 507 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 CDKL4Q5MAI5 379 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 NDRG1Q92597 394 aaKnown RBP10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 DPF3Q92784 378 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 ARMC5Q96C12 935 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 FAM83DQ9H4H8 585 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 ARHGEF4Q9NR80 690 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 EVA1BQ9NVM1 165 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 LRP5O75197 1615 aa10.5□□□□□ -0.73
PKNOX1-201ENST00000291547 COL5A3P25940 1745 aaPredicted RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 BCORQ6W2J9 1755 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 A0A1W2PPW3 197 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 B8ZZF3 427 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SMAD9O15198 467 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TLX3O43711 291 aaPredicted RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 GOT2P00505 430 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 RPS3P23396 243 aaKnown RBP eCLIP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 CD40LGP29965 261 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 PCBP1Q15365 356 aaKnown RBP eCLIP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ZNF404Q494X3 552 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC8B1Q6J4K2 584 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 MON1BQ7L1V2 547 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 SLC22A15Q8IZD6 547 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 RELTQ969Z4 430 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 NXPE2Q96DL1 559 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 GAL3ST4Q96RP7 486 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 MND1Q9BWT6 205 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 LYARQ9NX58 379 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 NOP16Q9Y3C1 178 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 PCDHGC4Q9Y5F7 938 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 C13orf42A0A1B0GVH6 325 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 PRORSD1PA6NEY8 169 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 EIF3FO00303 357 aaPredicted RBP10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ENTPD6O75354 484 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 VIPP01282 170 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 RHOQP17081 205 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 ALAS2P22557 587 aa10.49□□□□□ -0.73
PKNOX1-201ENST00000291547 TCEA1P23193 301 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms