RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 TSSK4Q6SA08 328 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 KCTD8Q6ZWB6 473 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 PIWIL4Q7Z3Z4 852 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 IGFN1Q86VF2 1251 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 VRK3Q8IV63 474 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 SYNPOQ8N3V7 929 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 TP53I13Q8NBR0 393 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 EFHD2Q96C19 240 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 MAELQ96JY0 434 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 SCYL1Q96KG9 808 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 PSD2Q9BQI7 771 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 TM7SF3Q9NS93 570 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 MRGBPQ9NV56 204 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 NFKBIL1Q9UBC1 381 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 XPR1Q9UBH6 696 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 GULP1Q9UBP9 304 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CD300AQ9UGN4 299 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CROTQ9UKG9 612 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 SCML1Q9UN30 329 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ZFC3H1O60293 1989 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 PI4KAP42356 2102 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 GPR179Q6PRD1 2367 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 KRT87PA6NCN2 255 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 SAC3D1A6NKF1 404 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ZNF839A8K0R7 811 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CDC7O00311 574 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 VPS26AO75436 327 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CDK14O94921 469 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CPNE6O95741 557 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 EIF2S1P05198 315 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 JUNP05412 331 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 C7P10643 843 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ZNF182P17025 639 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 RPS3P23396 243 aaKnown RBP eCLIP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 PBLDP30039 288 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 IGFALSP35858 605 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CCR10P46092 362 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CDK3Q00526 305 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CD300CQ08708 224 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 DMWDQ09019 674 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 HSPA14Q0VDF9 509 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ITGADQ13349 1161 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 BOP1Q14137 746 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 OXA1LQ15070 435 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 OR4D1Q15615 310 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CLPPQ16740 277 aaPredicted RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 SAMD4BQ5PRF9 694 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 REP15Q6BDI9 236 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 GALNT18Q6P9A2 607 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CRTC3Q6UUV7 619 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ABRAXAS1Q6UWZ7 409 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CYP2R1Q6VVX0 501 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 MACC1Q6ZN28 852 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 FRA10AC1Q70Z53 315 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ISCA2Q86U28 154 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 EPHX4Q8IUS5 362 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 PHYKPLQ8IUZ5 450 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 ZNF547Q8IVP9 402 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 EXT2Q93063 718 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CLDN23Q96B33 292 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 TSPAN17Q96FV3 270 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 VPS35Q96QK1 796 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 GPR174Q9BXC1 333 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 MROQ9BYG7 248 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 CHRDQ9H2X0 955 aa9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 TRMT6Q9UJA5 497 aaKnown RBP9.43□□□□□ -0.9
LRTOMT-201ENST00000289488 LATO43561 262 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 KDM1AO60341 852 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 CLPXO76031 633 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 SEC24DO94855 1032 aaPredicted RBP9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 SEMA4FO95754 770 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 BCL10O95999 233 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 LTA4HP09960 611 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 CD1DP15813 335 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 ZNF8P17098 575 aaPredicted RBP9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 TPRG1LQ5T0D9 272 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 LYPLAL1Q5VWZ2 237 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 FAM219BQ5XKK7 198 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 LRRC8EQ6NSJ5 796 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 TMEM220Q6QAJ8 160 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 RPS27LQ71UM5 84 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 NANOGNBQ7Z5D8 188 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 DHFR2Q86XF0 187 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 TRAPPC5Q8IUR0 188 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 ZC3H7AQ8IWR0 971 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 OR13F1Q8NGS4 319 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 OR2T34Q8NGX1 318 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 PNPT1Q8TCS8 783 aaKnown RBP9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 ULK4Q96C45 1275 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 LINGO1Q96FE5 620 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 NELL2Q99435 816 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 HGH1Q9BTY7 390 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 C8orf4Q9NR00 106 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 DAPK2Q9UIK4 370 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 PCDHB1Q9Y5F3 818 aa9.42□□□□□ -0.9
LRTOMT-201ENST00000289488 THADAQ6YHU6 1953 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms