RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GPRC5BQ9NZH0 403 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 ASF1AQ9Y294 204 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 DLX3O60479 287 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 TOP3BO95985 862 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 F3P13726 295 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC6A12P48065 614 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 PREPP48147 710 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 PDCD2Q16342 344 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF678Q5SXM1 525 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 PIGKQ92643 395 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 RHBDF1Q96CC6 855 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 EML4Q9HC35 981 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 MRPL40Q9NQ50 206 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 EVPLLA8MZ36 301 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF883P0CG24 379 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 POU1F1P28069 291 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 SRSF11Q05519 484 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 FAM129CQ86XR2 697 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 C10orf107Q8IVU9 208 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 MDM1Q8TC05 714 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PIF1Q9H611 641 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TM7SF3Q9NS93 570 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 NCKIPSDQ9NZQ3 722 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PCDHGB2Q9Y5G2 931 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ARHGEF33A8MVX0 844 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 CER1O95813 267 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 JUNDP17535 347 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PDHA2P29803 388 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 RPIAP49247 311 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 OC90Q02509 493 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 RPE65Q16518 533 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 FRMD7Q6ZUT3 714 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 C17orf82Q86X59 251 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 SPATA6LQ8N4H0 392 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 OR9A1PQ8NGU1 263 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PHF21AQ96BD5 680 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 VPS50Q96JG6 964 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PCBD2Q9H0N5 130 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TAAR2Q9P1P5 351 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 VTI1BQ9UEU0 232 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ZFC3H1O60293 1989 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 SYPP08247 313 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TRPC1P48995 793 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 GYS2P54840 703 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 UBE2IP63279 158 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 OGFOD3Q6PK18 319 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC9B2Q86UD5 537 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 POMGNT2Q8NAT1 580 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ICA1LQ8NDH6 482 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF548Q8NEK5 533 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 OR56A3Q8NH54 315 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF75CPQ92670 426 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PMEPA1Q969W9 287 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 RAD51AP1Q96B01 352 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PRRG4Q9BZD6 226 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 CD244Q9BZW8 370 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 THAP1Q9NVV9 213 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 AK5Q9Y6K8 562 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 SLCO1B1Q9Y6L6 691 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 GYG2O15488 501 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 GMFGO60234 142 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TGDSO95455 350 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 MLYCDO95822 493 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 IMPDH2P12268 514 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PKLRP30613 574 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PLA2G2CQ5R387 149 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 KANSL1Q7Z3B3 1105 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 PTGR2Q8N8N7 351 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TFGQ92734 400 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 SERPINI1Q99574 410 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TMEM79Q9BSE2 394 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 TMEM168Q9H0V1 697 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 NLGN3Q9NZ94 848 aa8.17□□□□□ -1.1
PTPDC1-201ENST00000288976 ATG2BQ96BY7 2078 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 AQP9O43315 295 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 UGDHO60701 494 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 ERAL1O75616 437 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PIAS2O75928 621 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 KRT33AO76009 404 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PGGT1BP53609 377 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 RPS7P62081 194 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 CHI3L2Q15782 390 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 GGTA1PQ4G0N0 100 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 LRRC56Q8IYG6 542 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 NACC2Q96BF6 587 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 GRAMD1AQ96CP6 724 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PITHD1Q9GZP4 211 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 MCM8Q9UJA3 840 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 PCTPQ9UKL6 214 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC6A14Q9UN76 642 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 THADAQ6YHU6 1953 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 A0A1B0GTQ1 180 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 LMO7DNF2Z398 122 aa8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-201ENST00000288976 CCNDBP1O95273 360 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms