RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 NCEH1Q6PIU2 408 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 ADGRG6Q86SQ4 1221 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 MFSD6LQ8IWD5 586 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 TTC29Q8NA56 475 aaPredicted RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SMYD1Q8NB12 490 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 PHC3Q8NDX5 983 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 FAM110BQ8TC76 370 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 MAGEB10Q96LZ2 347 aaPredicted RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 MUS81Q96NY9 551 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 TOR4AQ9NXH8 423 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 GALNT8Q9NY28 637 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 PAIP2BQ9ULR5 123 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CA14Q9ULX7 337 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 BCKDHAP12694 445 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CDH1P12830 882 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 DSC1Q08554 894 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 MEP1AQ16819 746 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 FAM46CQ5VWP2 391 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 GALNT18Q6P9A2 607 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 THOC6Q86W42 341 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 GATAD2AQ86YP4 633 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 IRF7Q92985 503 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CXorf40BQ96DE9 158 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 AIF1LQ9BQI0 150 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 HMG20AQ9NP66 347 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SEC14L3Q9UDX4 400 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 KLHL3Q9UH77 587 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 GSAPA4D1B5 854 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SOCS2O14508 198 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CREG1O75629 220 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 PRPS1L1P21108 318 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SRSF11Q05519 484 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 TGM3Q08188 693 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 BNIP3Q12983 259 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SYT16Q17RD7 645 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 XKR5Q6UX68 686 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SLCO6A1Q86UG4 719 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 SLC30A3Q99726 388 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 ELAC1Q9H777 363 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 PLGRKTQ9HBL7 147 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CMTM6Q9NX76 183 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 PTTG2Q9NZH5 202 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 NFATC1O95644 943 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 KLK1P06870 262 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 ACP5P13686 325 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 FUT4P22083 530 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 NOS3P29474 1203 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 ELP6Q0PNE2 266 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 TOP3AQ13472 1001 aaPredicted RBP13.95□□□□□ -0.18
TMEM47-201ENST00000275954 CARTPTQ16568 116 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 BPIFB1Q8TDL5 484 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 RIPOR3Q96MK2 946 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 POPDC3Q9HBV1 291 aa13.95□□□□□ -0.18
TMEM47-201ENST00000275954 TRIP11Q15643 1979 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 ENO2P09104 434 aaPredicted RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 EBLN1P0CF75 366 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 FAM91A1Q658Y4 838 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 FAM180BQ6P0A1 224 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 ZNF483Q8TF39 744 aaPredicted RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 YIPF4Q9BSR8 244 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CCM2LQ9NUG4 571 aaPredicted RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 PSME2Q9UL46 239 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 A0A1W2PPW3 197 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 DRGXA6NNA5 263 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 H3BNX3 289 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 MYL12BO14950 172 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 PDYNP01213 254 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CENPAP49450 140 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 PTCHD4Q6ZW05 846 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 LARP4Q71RC2 724 aaKnown RBP eCLIP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 ARMC8Q8IUR7 673 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CNTN4Q8IWV2 1026 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CMTR2Q8IYT2 770 aaKnown RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CEP44Q9C0F1 390 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 PLAC1Q9HBJ0 212 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 MARCH5Q9NX47 278 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 FZD4Q9ULV1 537 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 NPIPB15A6NHN6 443 aaPredicted RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CTSAP10619 480 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 ELK4P28324 431 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CDK9P50750 372 aaKnown RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 NUDT6P53370 316 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 FBXW4P57775 412 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 RPS13P62277 151 aaKnown RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 MLLT1Q03111 559 aaPredicted RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 FER1L6Q2WGJ9 1857 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 UAP1L1Q3KQV9 507 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 SPANXN2Q5MJ10 180 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 OGFRL1Q5TC84 451 aaPredicted RBP13.94□□□□□ -0.18
TMEM47-201ENST00000275954 BRAT1Q6PJG6 821 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 C16orf62Q7Z3J2 963 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 L3HYPDHQ96EM0 354 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 C1QTNF1Q9BXJ1 281 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 FBXW2Q9UKT8 454 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 CCL26Q9Y258 94 aa13.94□□□□□ -0.18
TMEM47-201ENST00000275954 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms