RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 GABREP78334 506 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 RPA4Q13156 261 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 RBBP7Q16576 425 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 LACTB2Q53H82 288 aaPredicted RBP17.28■□□□□ 0.36
SEC22C-202ENST00000273156 VWA5B1Q5TIE3 1220 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 ACAD11Q709F0 780 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 C11orf96Q7Z7L8 435 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 RASGRP3Q8IV61 690 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 CFAP61Q8NHU2 1237 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 UBTD2Q8WUN7 234 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 MRPL40Q9NQ50 206 aaKnown RBP17.28■□□□□ 0.36
SEC22C-202ENST00000273156 THSD1Q9NS62 852 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 OPTCQ9UBM4 332 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 ZNHIT2Q9UHR6 403 aa17.28■□□□□ 0.36
SEC22C-202ENST00000273156 LAMA5O15230 3695 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 AZIN1O14977 448 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 NUDT21O43809 227 aaKnown RBP17.27■□□□□ 0.36
SEC22C-202ENST00000273156 CRCPO75575 148 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 UBOX5O94941 541 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 SERPINA6P08185 405 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 RBMS1P29558 406 aaKnown RBP17.27■□□□□ 0.36
SEC22C-202ENST00000273156 PDHA2P29803 388 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 PIK3CGP48736 1102 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 HSPA7P48741 367 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 PKNOX1P55347 436 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 GTF2H2Q13888 395 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 TCEA2Q15560 299 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 PDCD2Q16342 344 aaPredicted RBP17.27■□□□□ 0.36
SEC22C-202ENST00000273156 COL28A1Q2UY09 1125 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 GALNTL6Q49A17 601 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 METTL21CQ5VZV1 264 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 GTF2H2CQ6P1K8 395 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 LILRA3Q8N6C8 439 aaPredicted RBP17.27■□□□□ 0.36
SEC22C-202ENST00000273156 GPBAR1Q8TDU6 330 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 AGAP11Q8TF27 550 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 ATP6V1E2Q96A05 226 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 CCDC74AQ96AQ1 378 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 GFM1Q96RP9 751 aaKnown RBP17.27■□□□□ 0.36
SEC22C-202ENST00000273156 ZBTB26Q9HCK0 441 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 TCF7L2Q9NQB0 619 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 FIS1Q9Y3D6 152 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 PCDHGA8Q9Y5G5 932 aa17.27■□□□□ 0.36
SEC22C-202ENST00000273156 TMEM233B4DJY2 109 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 K7EPI3 171 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 NTN3O00634 580 aaPredicted RBP17.26■□□□□ 0.35
SEC22C-202ENST00000273156 PPP6CO00743 305 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 FCHO1O14526 889 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 CCNT2O60583 730 aaKnown RBP17.26■□□□□ 0.35
SEC22C-202ENST00000273156 STK16O75716 305 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 ESRRBO95718 433 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 GGT5P36269 586 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 PCBP4P57723 403 aaKnown RBP17.26■□□□□ 0.35
SEC22C-202ENST00000273156 EIF3IQ13347 325 aaKnown RBP17.26■□□□□ 0.35
SEC22C-202ENST00000273156 PLA2G4EQ3MJ16 856 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 C14orf28Q4W4Y0 310 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 SLC9B1Q4ZJI4 515 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 GOLGA7Q7Z5G4 137 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 CLNKQ7Z7G1 428 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 HOMEZQ8IX15 550 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 ARL14Q8N4G2 192 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 TEX9Q8N6V9 391 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 ZNF248Q8NDW4 579 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 WDR36Q8NI36 951 aaKnown RBP17.26■□□□□ 0.35
SEC22C-202ENST00000273156 ATL1Q8WXF7 558 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 ZNF382Q96SR6 550 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 TUBB6Q9BUF5 446 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 CCDC28BQ9BUN5 200 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 STRADBQ9C0K7 418 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 SYNDIG1Q9H7V2 258 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 PFDN4Q9NQP4 134 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 TRIM33Q9UPN9 1127 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 PRKAB1Q9Y478 270 aa17.26■□□□□ 0.35
SEC22C-202ENST00000273156 KCNJ13O60928 360 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 OTCP00480 354 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 GNPDA1P46926 289 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 BNIP1Q12981 228 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 TUBB3Q13509 450 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 LRP8Q14114 963 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 NFE2L1Q14494 772 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 C18orf21Q32NC0 220 aaPredicted RBP17.25■□□□□ 0.35
SEC22C-202ENST00000273156 GPRIN3Q6ZVF9 776 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 PDZD3Q86UT5 571 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 FBXO15Q8NCQ5 510 aaPredicted RBP17.25■□□□□ 0.35
SEC22C-202ENST00000273156 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
SEC22C-202ENST00000273156 CCDC138Q96M89 665 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 TMEM79Q9BSE2 394 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 NOL11Q9H8H0 719 aaKnown RBP17.25■□□□□ 0.35
SEC22C-202ENST00000273156 TNFRSF12AQ9NP84 129 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 SUFUQ9UMX1 484 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 ASB1Q9Y576 335 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 ENTPD2Q9Y5L3 495 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 LRRK1Q38SD2 2015 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 CCDC187A0A096LP49 1063 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 B4DGG1 531 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 TLX3O43711 291 aaPredicted RBP17.25■□□□□ 0.35
SEC22C-202ENST00000273156 KATNA1O75449 491 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 ATP5HO75947 161 aa17.25■□□□□ 0.35
SEC22C-202ENST00000273156 CHEK2O96017 543 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms