RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 C1GALT1C1LP0DN25 315 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 F3P13726 295 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 PRPH2P23942 346 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 PKLRP30613 574 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 KCNJ2P63252 427 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 TSTA3Q13630 321 aaPredicted RBP13.63□□□□□ -0.23
SS18-201ENST00000269137 SGO1Q5FBB7 561 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 FBXW10Q5XX13 1052 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 SLC30A9Q6PML9 568 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 NXPE4Q6UWF7 544 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 PARGQ86W56 976 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 SNX32Q86XE0 403 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 LMNTD1Q8N9Z9 388 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 FNDC5Q8NAU1 212 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
SS18-201ENST00000269137 OR2L8Q8NGY9 312 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 GSDMCQ9BYG8 508 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 ACPTQ9BZG2 426 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 KLF15Q9UIH9 416 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 EML5Q05BV3 1969 aa13.63□□□□□ -0.23
SS18-201ENST00000269137 A0A1W2PPV9 198 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 HSD3B1P14060 373 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 CD1EP15812 388 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 HSD3B2P26439 372 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 CD38P28907 300 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 CPOXP36551 454 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 DIO3P55073 304 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 HMGCS1Q01581 520 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 CSTF3Q12996 717 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 MAD2L1Q13257 205 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 LAPTM5Q13571 262 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 RPS6KA2Q15349 733 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 IMPG1Q17R60 797 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 KIF19Q2TAC6 998 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 PDCD4Q53EL6 469 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 AGKQ53H12 422 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 PAGE2BQ5JRK9 111 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 THEMIS2Q5TEJ8 643 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 TMPRSS11BQ86T26 416 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 PARP9Q8IXQ6 854 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 DEFB119Q8N690 84 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 LINC01555Q8NAE3 123 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 OR52E1Q8NGJ3 308 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 FBXO27Q8NI29 283 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 C1orf216Q8TAB5 229 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 DNASE2BQ8WZ79 361 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 EDAQ92838 391 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 REPS1Q96D71 796 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 RAB3IPQ96QF0 476 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 LRTM1Q9HBL6 345 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 C1orf109Q9NX04 203 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 ASIC5Q9NY37 505 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 ZNF624Q9P2J8 865 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 SH2B3Q9UQQ2 575 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 FANCMQ8IYD8 2048 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 TECTAO75443 2155 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 MEI4A8MW99 385 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 GSC2O15499 205 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 MAP3K13O43283 966 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 WNT1P04628 370 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 PCSK2P16519 638 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 VARSP26640 1264 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 NEK2P51955 445 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 DNAL1Q4LDG9 190 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 CATSPEREQ5SY80 951 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 MED27Q6P2C8 311 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 PAOXQ6QHF9 649 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 C17orf64Q86WR6 236 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 ZFAND4Q86XD8 727 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 FUNDC1Q8IVP5 155 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 LAS2Q8IYD9 372 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 PHACTR4Q8IZ21 702 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 ABHD11Q8NFV4 315 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 OR7G3Q8NG95 312 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 ZFPM2Q8WW38 1151 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 SH3KBP1Q96B97 665 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 MTFMTQ96DP5 389 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 HSPA12BQ96MM6 686 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 DUSP15Q9H1R2 295 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 TCEAL2Q9H3H9 227 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 BRF2Q9HAW0 419 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 SPATA6Q9NWH7 488 aaPredicted RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 GEMIN8Q9NWZ8 242 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
SS18-201ENST00000269137 ZIM2Q9NZV7 527 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 ICKQ9UPZ9 632 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 TSC22D4Q9Y3Q8 395 aa13.62□□□□□ -0.23
SS18-201ENST00000269137 TLR4O00206 839 aa13.61□□□□□ -0.23
SS18-201ENST00000269137 RASSF9O75901 435 aa13.61□□□□□ -0.23
SS18-201ENST00000269137 PDGFBP01127 241 aaPredicted RBP13.61□□□□□ -0.23
SS18-201ENST00000269137 SNRPB2P08579 225 aaKnown RBP13.61□□□□□ -0.23
SS18-201ENST00000269137 SLC2A4P14672 509 aa13.61□□□□□ -0.23
SS18-201ENST00000269137 BCKDHBP21953 392 aa13.61□□□□□ -0.23
SS18-201ENST00000269137 SLC19A1P41440 591 aa13.61□□□□□ -0.23
SS18-201ENST00000269137 STX5Q13190 355 aa13.61□□□□□ -0.23
SS18-201ENST00000269137 KIAA0040Q15053 153 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms