RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 KLF1Q13351 362 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-201ENST00000267935 GRB7Q14451 532 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 INAQ16352 499 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.57□□□□□ -0.24
COMMD4-201ENST00000267935 PCID2Q5JVF3 399 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 ATG9BQ674R7 924 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 MTFR2Q6P444 385 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-201ENST00000267935 FJX1Q86VR8 437 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 PRSS58Q8IYP2 241 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 MPP5Q8N3R9 675 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 METTL27Q8N6F8 245 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-201ENST00000267935 CCDC89Q8N998 374 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 CATSPER1Q8NEC5 780 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 HMGCLL1Q8TB92 370 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 HAS2Q92819 552 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 RELTQ969Z4 430 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 MVB12AQ96EY5 273 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 MIPEPQ99797 713 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 LACRTQ9GZZ8 138 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.57□□□□□ -0.24
COMMD4-201ENST00000267935 RAB6BQ9NRW1 208 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 TCAF1Q9Y4C2 921 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 CENPEQ02224 2701 aa13.57□□□□□ -0.24
COMMD4-201ENST00000267935 E2F3O00716 465 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 PRICKLE3O43900 615 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-201ENST00000267935 CTSVO60911 334 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 BMP10O95393 424 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 C1orf105O95561 183 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 SERPINA7P05543 415 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 HEXBP07686 556 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 APRTP07741 180 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 ANXA5P08758 320 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
COMMD4-201ENST00000267935 HSD17B2P37059 387 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 ART3Q13508 389 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 SEL1L2Q5TEA6 688 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 CNSTQ6PJW8 725 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 TMEM207Q6UWW9 146 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 RIPOR1Q6ZS17 1223 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 ZNF534Q76KX8 674 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 TMEM151BQ8IW70 566 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 OTUD6BQ8N6M0 293 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 OR2L3Q8NG85 312 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 DNAJB8Q8NHS0 232 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 CABS1Q96KC9 395 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 ZFYVE21Q9BQ24 234 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 SLX1AQ9BQ83 275 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 SPATA7Q9P0W8 599 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 PAK5Q9P286 719 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 PTGFRNQ9P2B2 879 aa13.56□□□□□ -0.24
COMMD4-201ENST00000267935 R3HDM2Q9Y2K5 976 aaKnown RBP13.56□□□□□ -0.24
COMMD4-201ENST00000267935 SNRNP200O75643 2136 aaKnown RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 SPENQ96T58 3664 aaKnown RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 ZNF839A8K0R7 811 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 H3BMM5 538 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 PRR35P0CG20 571 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.249e-8■■■■□ 25.4
COMMD4-201ENST00000267935 NPY2RP49146 381 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 TNFSF10P50591 281 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 CASP6P55212 293 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 RBPJQ06330 500 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 Q0VFX4 171 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 LONRF1Q17RB8 773 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 GFRALQ6UXV0 394 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 LDB1Q86U70 411 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 SMPDL3AQ92484 453 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 RERGQ96A58 199 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 ZNF778Q96MU6 729 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 TRIM56Q9BRZ2 755 aaKnown RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 DPH7Q9BTV6 452 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 MRPS30Q9NP92 439 aaKnown RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 C14orf105Q9NVL8 296 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 RIC8BQ9NVN3 520 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 DRG1Q9Y295 367 aaKnown RBP13.55□□□□□ -0.24
COMMD4-201ENST00000267935 MYO7BQ6PIF6 2116 aa13.55□□□□□ -0.24
COMMD4-201ENST00000267935 IGLV3-12A0A075B6K2 115 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 LOC105369274A0A096LPK9 316 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 LOC102723532A0A0G2JNH3 316 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 LIASO43766 372 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 CCNDBP1O95273 360 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 RPA3P35244 121 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-201ENST00000267935 GRIA1P42261 906 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 SEMA3AQ14563 771 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 VWA2Q5GFL6 755 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 GARNL3Q5VVW2 1013 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 FRMPD2BQ6IN97 320 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 MRNIPQ6NTE8 343 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 FBXO42Q6P3S6 717 aa13.54□□□□□ -0.24
COMMD4-201ENST00000267935 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms