RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 AMD1P17707 334 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 WNT3P56703 355 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 EMX1Q04741 257 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 RAPSNQ13702 412 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ARHGEF7Q14155 803 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ACOX1Q15067 660 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
BEST3-201ENST00000266661 IQCCQ4KMZ1 466 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 SLC44A4Q53GD3 710 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 KDM4DQ6B0I6 523 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 CAPN13Q6MZZ7 669 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 LINC00299Q6ZSB3 139 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 CEP68Q76N32 757 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 SPRED2Q7Z698 418 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 SERPINA11Q86U17 422 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 RBM12BQ8IXT5 1001 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 TMEM132CQ8N3T6 1108 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 PIK3C3Q8NEB9 887 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 DDHD1Q8NEL9 900 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 SNRNP27Q8WVK2 155 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 ASB11Q8WXH4 323 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 FBXL8Q96CD0 374 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 APIPQ96GX9 242 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 BCL7BQ9BQE9 202 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 C2orf49Q9BVC5 232 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 RAD21L1Q9H4I0 556 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 IL1RAPQ9NPH3 570 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ABCB8Q9NUT2 735 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 THG1LQ9NWX6 298 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 INTS6Q9UL03 887 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 ERVW-1Q9UQF0 538 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ERGIC3Q9Y282 383 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 TMED5Q9Y3A6 229 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 HSPE1-MOB4S4R3N1 261 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 XIRP2A4UGR9 3374 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 TRANK1O15050 2925 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 GFYI3L273 518 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 ZSCAN9O15535 394 aaPredicted RBP12.09□□□□□ -0.47
BEST3-201ENST00000266661 GABARAPO95166 117 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 CCNDBP1O95273 360 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 PBX2P40425 430 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 CD97P48960 835 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 TRPC1P48995 793 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 CLK3P49761 638 aaKnown RBP12.09□□□□□ -0.47
BEST3-201ENST00000266661 DAPP51397 102 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 NEK2P51955 445 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 RAD23AP54725 363 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 CXCR4P61073 352 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 PTSQ03393 145 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 CDH18Q13634 790 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 KEAP1Q14145 624 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 PSRC1Q6PGN9 363 aaPredicted RBP12.09□□□□□ -0.47
BEST3-201ENST00000266661 CRTC3Q6UUV7 619 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 RFLNAQ6ZTI6 216 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 TPRG1Q6ZUI0 275 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 ZDHHC21Q8IVQ6 265 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 FAM9CQ8IZT9 166 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 CENPSQ8N2Z9 138 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 PARP8Q8N3A8 854 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 TCAIMQ8N3R3 496 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 SELENOMQ8WWX9 145 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 YIPF6Q96EC8 236 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 SCRN2Q96FV2 425 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 EGLN2Q96KS0 407 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 FAM210AQ96ND0 272 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 MCCC1Q96RQ3 725 aaPredicted RBP12.09□□□□□ -0.47
BEST3-201ENST00000266661 ATP13A3Q9H7F0 1226 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 RMND5AQ9H871 391 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 PARVBQ9HBI1 364 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
BEST3-201ENST00000266661 SPTBN5Q9NRC6 3674 aaKnown RBP12.09□□□□□ -0.47
BEST3-201ENST00000266661 CXorf51AA0A1B0GTR3 108 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ZNF99A8MXY4 864 aaPredicted RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 BCKDKO14874 412 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 NDUFS2O75306 463 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 KCNK5O95279 499 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 MPC1LP0DKB6 136 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 IMPDH2P12268 514 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 GPX2P18283 190 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 LHCGRP22888 699 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 HOXA9P31269 272 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 C21orf58P58505 322 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 SLC35A2P78381 396 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 LMAN2Q12907 356 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 SPIDRQ14159 915 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ATP13A5Q4VNC0 1218 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 IGFN1Q86VF2 1251 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ANKRD46Q86W74 232 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 PTOV1Q86YD1 416 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ZZZ3Q8IYH5 903 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 TDHQ8IZJ6 230 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 CPXM2Q8N436 756 aa12.08□□□□□ -0.48
BEST3-201ENST00000266661 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
BEST3-201ENST00000266661 OR10Q1Q8NGQ4 319 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms