RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 TLR4O00206 839 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ACOT8O14734 319 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 RNASEH1O60930 286 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 GMNNO75496 209 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 F7P08709 466 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PABPC4LP0CB38 370 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 UROSP10746 265 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 UMPSP11172 480 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PKMP14618 531 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ZNF37AP17032 561 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 HOXB6P17509 224 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ACVRL1P37023 503 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PEX19P40855 299 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 RGS4P49798 205 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ERFP50548 548 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ARSDP51689 593 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ZNF140P52738 457 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CDKN2DP55273 166 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 POLE2P56282 527 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 KCNK10P57789 538 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 IL2P60568 153 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CLCQ05315 142 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 EIF4HQ15056 248 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 RBBP7Q16576 425 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ZNF789Q5FWF6 425 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ARTNQ5T4W7 220 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 KANK2Q63ZY3 851 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ZNF776Q68DI1 518 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 USP53Q70EK8 1073 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 FKBP9P1Q75LS8 142 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 GPSM1Q86YR5 675 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 GALNT13Q8IUC8 556 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 DDIASQ8IXT1 998 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ALDH16A1Q8IZ83 802 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 SPATA6LQ8N4H0 392 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 OR2T34Q8NGX1 318 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 TWIST2Q8WVJ9 160 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 LPGAT1Q92604 370 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 EXT2Q93063 718 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 TUBGCP3Q96CW5 907 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 DTNBP1Q96EV8 351 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 MARK4Q96L34 752 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PSMG3-AS1Q96PY0 264 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CCNL2Q96S94 520 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 SPATA16Q9BXB7 569 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 C1QTNF3Q9BXJ4 246 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 TRIM54Q9BYV2 358 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 ZNF696Q9H7X3 374 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 AKTIPQ9H8T0 292 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PDFQ9HBH1 243 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 MID1IP1Q9NPA3 183 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 UCKL1Q9NWZ5 548 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 FBXL12Q9NXK8 326 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 NUDT4Q9NZJ9 180 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CCDC167Q9P0B6 97 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 AGO1Q9UL18 857 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CA5BQ9Y2D0 317 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CRYL1Q9Y2S2 319 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PKP3Q9Y446 797 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PCDHGA7Q9Y5G6 932 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 SLC30A1Q9Y6M5 507 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 PIKFYVEQ9Y2I7 2098 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 CROCCQ5TZA2 2017 aa6.86□□□□□ -1.31
SMARCE1-201ENST00000264640 A0A0J9YYE9 177 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 CLEC18AA5D8T8 446 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 TMEM233B4DJY2 109 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 E7ENX8 843 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 UBXN8O00124 270 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 NR5A2O00482 541 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 AURKAO14965 403 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 CASC3O15234 703 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 MID1O15344 667 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 RNASEH2AO75792 299 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 CDK14O94921 469 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 ESRRBO95718 433 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 CLPTM1O96005 669 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 ESR1P03372 595 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 GPIP06744 558 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 HSD17B1P14061 328 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 GPX3P22352 226 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 PSMA4P25789 261 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 EEF1DP29692 281 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 HLA-FP30511 346 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 CORO1AP31146 461 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 MAT2AP31153 395 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 FMO4P31512 558 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 RXRGP48443 463 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 SCNN1BP51168 640 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 CCNHP51946 323 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 PLK1P53350 603 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 ADARP55265 1226 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 PPP2CBP62714 309 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 PPP2CAP67775 309 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 MAD2L1Q13257 205 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 GALNT3Q14435 633 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 TGIF1Q15583 401 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 PFKFB4Q16877 469 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 ISXQ2M1V0 245 aa6.85□□□□□ -1.31
SMARCE1-201ENST00000264640 POM121L1PQ3SYA9 428 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms