RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 ITGAXP20702 1163 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 VARSP26640 1264 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 AK4P27144 223 aaPredicted RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 PKLRP30613 574 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 CPOXP36551 454 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 PGM1P36871 562 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 MRPL19P49406 292 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 ELF3P78545 371 aaPredicted RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 EMX2Q04743 252 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 ZNF33BQ06732 778 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 PCDH1Q08174 1060 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 ILF3Q12906 894 aaKnown RBP eCLIP8.03□□□□□ -1.12
COPS4-201ENST00000264389 MTAPQ13126 283 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 ART3Q13508 389 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 DDX39BQ13838 428 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 CLCA4Q14CN2 919 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SMU1Q2TAY7 513 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 PAGE2BQ5JRK9 111 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 REP15Q6BDI9 236 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 CYB5D1Q6P9G0 228 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SLC30A9Q6PML9 568 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 LPCAT2Q7L5N7 544 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 ZFAND4Q86XD8 727 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 RGL4Q8IZJ4 473 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SLC22A18ASQ8N1D0 253 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 CAMKK1Q8N5S9 505 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 LMNTD1Q8N9Z9 388 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 FAM174AQ8TBP5 190 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SETD7Q8WTS6 366 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 SMPDL3AQ92484 453 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SLC6A18Q96N87 628 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 HAUS8Q9BT25 410 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 THTPAQ9BU02 230 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 EFCAB11Q9BUY7 163 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 MRPL1Q9BYD6 325 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 MMADHCQ9H3L0 296 aaPredicted RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 MVB12BQ9H7P6 319 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 EFCAB1Q9HAE3 211 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SDR39U1Q9NRG7 319 aaPredicted RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 C1orf109Q9NX04 203 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 TRNAU1APQ9NX07 287 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 ZIM2Q9NZV7 527 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 TAC3Q9UHF0 121 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 SH2B3Q9UQQ2 575 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 EIF3LQ9Y262 564 aaKnown RBP8.03□□□□□ -1.12
COPS4-201ENST00000264389 CCL27Q9Y4X3 112 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 PCDHGA11Q9Y5H2 935 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 PCDHGA10Q9Y5H3 936 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 GPR45Q9Y5Y3 372 aa8.03□□□□□ -1.12
COPS4-201ENST00000264389 PRUNE2Q8WUY3 3088 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 PIPSLA2A3N6 862 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 A8MUI8 341 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 MRASO14807 208 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 ANGPT2O15123 496 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 GPR37O15354 613 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 SEC22BO75396 215 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CIB2O75838 187 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 RASSF9O75901 435 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 DCNP07585 359 aaKnown RBP8.02□□□□□ -1.13
COPS4-201ENST00000264389 C1GALT1C1LP0DN25 315 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CDH1P12830 882 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CD1EP15812 388 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 NPPBP16860 134 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 PRPH2P23942 346 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 MAPK1P28482 360 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CASP2P42575 452 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 RAB28P51157 221 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 NEK2P51955 445 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 KCNK10P57789 538 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 PHEXP78562 749 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
COPS4-201ENST00000264389 TBL3Q12788 808 aaKnown RBP8.02□□□□□ -1.13
COPS4-201ENST00000264389 GRIK2Q13002 908 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 LAPTM5Q13571 262 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 SLBPQ14493 270 aaKnown RBP eCLIP8.02□□□□□ -1.13
COPS4-201ENST00000264389 RPE65Q16518 533 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CYP2A13Q16696 494 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 HIST2H2ACQ16777 129 aaPredicted RBP8.02□□□□□ -1.13
COPS4-201ENST00000264389 CATSPEREQ5SY80 951 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CACHD1Q5VU97 1274 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 IL23RQ5VWK5 629 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 ATG9BQ674R7 924 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 HIST2H2AA3Q6FI13 130 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 MED27Q6P2C8 311 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CYP20A1Q6UW02 462 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 SLCO4C1Q6ZQN7 724 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 C17orf64Q86WR6 236 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 SCUBE1Q8IWY4 988 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 ULK2Q8IYT8 1036 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 DEFB107AQ8IZN7 70 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 C2orf73Q8N5S3 287 aaPredicted RBP8.02□□□□□ -1.13
COPS4-201ENST00000264389 KYQ8NBH2 561 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 FAM13CQ8NE31 585 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 OR52E1Q8NGJ3 308 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 WDR20Q8TBZ3 569 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 SH3KBP1Q96B97 665 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CXorf40BQ96DE9 158 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 WDR34Q96EX3 536 aa8.02□□□□□ -1.13
COPS4-201ENST00000264389 CMTM7Q96FZ5 175 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms