RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PIM1P11309 404 aaPredicted RBP15.39■□□□□ 0.05
USE1-201ENST00000263897 ITGAXP20702 1163 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 OTX2P32243 289 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 RPA3P35244 121 aaPredicted RBP15.39■□□□□ 0.05
USE1-201ENST00000263897 PNLIPRP1P54315 467 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 VSX2P58304 361 aaPredicted RBP15.39■□□□□ 0.05
USE1-201ENST00000263897 ATP1A4Q13733 1029 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 NAA25Q14CX7 972 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 BBS9Q3SYG4 887 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 COLEC12Q5KU26 742 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 SPANXN3Q5MJ09 141 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 FRMPD2BQ6IN97 320 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 OVCH1Q7RTY7 1134 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 OR4N4Q8N0Y3 316 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 PDIK1LQ8N165 341 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 TTC29Q8NA56 475 aaPredicted RBP15.39■□□□□ 0.05
USE1-201ENST00000263897 GABPB2Q8TAK5 448 aaPredicted RBP15.39■□□□□ 0.05
USE1-201ENST00000263897 CD200R1Q8TD46 325 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 ZNF480Q8WV37 535 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 RUNDC3BQ96NL0 473 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 MRPS30Q9NP92 439 aaKnown RBP15.39■□□□□ 0.05
USE1-201ENST00000263897 PYCARDQ9ULZ3 195 aa15.39■□□□□ 0.05
USE1-201ENST00000263897 UBR5O95071 2799 aaPredicted RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 HYKKA2RU49 373 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 E7ENX8 843 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 SMAPO00193 183 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 EIF3FO00303 357 aaPredicted RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 NRP2O60462 931 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 AHSGP02765 367 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 ALBP02768 609 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 GABRB3P28472 473 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 SKIV2L2P42285 1042 aaKnown RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 CARSP49589 748 aaKnown RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 PGDP52209 483 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 TIAL1Q01085 375 aaKnown RBP eCLIP15.38■□□□□ 0.05
USE1-201ENST00000263897 DR1Q01658 176 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 TAP2Q03519 686 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 PRDX1Q06830 199 aaKnown RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 TSTA3Q13630 321 aaPredicted RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 MORF4L2Q15014 288 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 UGT3A1Q6NUS8 523 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 RNF44Q7L0R7 432 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 MRGPREQ86SM8 312 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 TMEM151BQ8IW70 566 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 CPNE9Q8IYJ1 553 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 FKBP10Q96AY3 582 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 PLCD4Q9BRC7 762 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 SLC6A20Q9NP91 592 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 ANKMY1Q9P2S6 941 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 ZC3H7BQ9UGR2 993 aaKnown RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 PCDHGB7Q9Y5F8 929 aa15.38■□□□□ 0.05
USE1-201ENST00000263897 MDC1Q14676 2089 aaKnown RBP15.38■□□□□ 0.05
USE1-201ENST00000263897 FLNCQ14315 2725 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 PCSK5Q92824 1860 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 A6NL46 340 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 CCDC188H7C350 402 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 PEX12O00623 359 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 SYF2O95926 243 aaKnown RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 IGHEP01854 428 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 UMODP07911 640 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 ELK3P41970 407 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 PAFAH1B1P43034 410 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 FOXL2P58012 376 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 IGFBP7Q16270 282 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 ICE2Q659A1 982 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 HIBCHQ6NVY1 386 aaPredicted RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 KIAA0408Q6ZU52 694 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 UBE2R2Q712K3 238 aaPredicted RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 PIWIL4Q7Z3Z4 852 aaKnown RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 CNTN4Q8IWV2 1026 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 LRRC56Q8IYG6 542 aaPredicted RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 PPFIBP2Q8ND30 876 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 FDCSPQ8NFU4 85 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 EEF1AKMT1Q8WVE0 214 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 NACC2Q96BF6 587 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 CERS2Q96G23 380 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 FER1L6-AS2Q96M78 137 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 PWWP2AQ96N64 755 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 NDNQ99608 321 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 ZFYVE21Q9BQ24 234 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 SLC26A1Q9H2B4 701 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 WDR54Q9H977 334 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 PLAC1Q9HBJ0 212 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 TAS2R13Q9NYV9 303 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 RNF14Q9UBS8 474 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 TAC3Q9UHF0 121 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 TRMT6Q9UJA5 497 aaKnown RBP15.37■□□□□ 0.05
USE1-201ENST00000263897 BSNQ9UPA5 3926 aa15.37■□□□□ 0.05
USE1-201ENST00000263897 IGKV1-8A0A0C4DH67 115 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 H0YGG7 62 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 TTI1O43156 1089 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 EIF2S1P05198 315 aaKnown RBP15.36■□□□□ 0.05
USE1-201ENST00000263897 OR1D4P47884 311 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 ARF3P61204 181 aaPredicted RBP15.36■□□□□ 0.05
USE1-201ENST00000263897 ABATP80404 500 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 FOXK1P85037 733 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 RELAQ04206 551 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 NKG7Q16617 165 aa15.36■□□□□ 0.05
USE1-201ENST00000263897 DCAF10Q5QP82 559 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms