RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MYO1CO00159 1063 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 TNFRSF10CO14798 259 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 PPM1DO15297 605 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 TRIM13O60858 407 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 RECQL5O94762 991 aaPredicted RBP12.91□□□□□ -0.34
SGCA-201ENST00000262018 ESR1P03372 595 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 RBP1P09455 135 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 GLRBP48167 497 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
SGCA-201ENST00000262018 IFT88Q13099 833 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 NFATC2Q13469 925 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 SQSTM1Q13501 440 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 ACAP2Q15057 778 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 CHRNA6Q15825 494 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 CTSL3PQ5NE16 218 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 KLC3Q6P597 504 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 ZCCHC23Q6ZST2 131 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 HSD11B1LQ7Z5J1 315 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 GPR26Q8NDV2 337 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 C10orf82Q8WW14 230 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 PLEKHG4BQ96PX9 1271 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 TTC1Q99614 292 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 UNKQ9C0B0 810 aaKnown RBP12.91□□□□□ -0.34
SGCA-201ENST00000262018 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 ASB8Q9H765 288 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 TAAR2Q9P1P5 351 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 CPSF2Q9P2I0 782 aaKnown RBP12.91□□□□□ -0.34
SGCA-201ENST00000262018 HIVEP1P15822 2718 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 ZFHX3Q15911 3703 aa12.91□□□□□ -0.34
SGCA-201ENST00000262018 PIPSLA2A3N6 862 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 RGSL1A5PLK6 1076 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 A6NCN8 305 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 CCT8L1PA6NM43 557 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 TMEM114B3SHH9 223 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 PRMT5O14744 637 aaPredicted RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 OR1I1O60431 355 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 PYGLP06737 847 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 ZNF37AP17032 561 aaPredicted RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 ZNF7P17097 686 aaPredicted RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 ACRV1P26436 265 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 CA5AP35218 305 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 SLC1A6P48664 564 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 SPINT3P49223 89 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 ABCE1P61221 599 aaKnown RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 ILF3Q12906 894 aaKnown RBP eCLIP12.9□□□□□ -0.34
SGCA-201ENST00000262018 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 LIPMQ5VYY2 423 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 ZNF765Q7L2R6 523 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 NRROSQ86YC3 692 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 CRLF3Q8IUI8 442 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 APLFQ8IW19 511 aaPredicted RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 SPATA6LQ8N4H0 392 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 DTX3LQ8TDB6 740 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 NUS1Q96E22 293 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 DTD2Q96FN9 168 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 AHCYL2Q96HN2 611 aaKnown RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 SLC25A23Q9BV35 468 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 GSDMCQ9BYG8 508 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 C20orf27Q9GZN8 174 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 RASSF4Q9H2L5 321 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 ZNF395Q9H8N7 513 aaPredicted RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 CARS2Q9HA77 564 aaKnown RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 SYTL2Q9HCH5 934 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 NPHS2Q9NP85 383 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 SLAMF7Q9NQ25 335 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 PKD2L2Q9NZM6 624 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 NFKBIL1Q9UBC1 381 aaPredicted RBP12.9□□□□□ -0.34
SGCA-201ENST00000262018 USH1CQ9Y6N9 552 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 ADGRG4Q8IZF6 3080 aa12.9□□□□□ -0.34
SGCA-201ENST00000262018 PRSS38A1L453 326 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
SGCA-201ENST00000262018 GPR39O43194 453 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 ITM2AO43736 263 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 DLX3O60479 287 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 VPS26AO75436 327 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 CD1DP15813 335 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 GM2AP17900 193 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 AK4P27144 223 aaPredicted RBP12.89□□□□□ -0.35
SGCA-201ENST00000262018 ETV3P41162 512 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 DCDC1P59894 354 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 DNAJB13P59910 316 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 ASPHQ12797 758 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 MAP7Q14244 749 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 NR6A1Q15406 480 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 SLC30A9Q6PML9 568 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 Q6ZVL8 140 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 TECPR1Q7Z6L1 1165 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 ZNF761Q86XN6 746 aaPredicted RBP12.89□□□□□ -0.35
SGCA-201ENST00000262018 NKAPQ8N5F7 415 aaKnown RBP12.89□□□□□ -0.35
SGCA-201ENST00000262018 RFWD2Q8NHY2 731 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 CCT6BQ92526 530 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 KCNJ9Q92806 393 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
SGCA-201ENST00000262018 SORT1Q99523 831 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 GPR21Q99679 349 aa12.89□□□□□ -0.35
SGCA-201ENST00000262018 GATA5Q9BWX5 397 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms