RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MPP2Q14168 576 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 IRGCQ6NXR0 463 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 TTC23LQ6PF05 361 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 KLHL35Q6PF15 583 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 CDHR3Q6ZTQ4 885 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 UBE2R2Q712K3 238 aaPredicted RBP11.18□□□□□ -0.62
PFDN1-201ENST00000261813 ISCA2Q86U28 154 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 TAX1BP1Q86VP1 789 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 PLXDC1Q8IUK5 500 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 SLC22A9Q8IVM8 553 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 ADGRF3Q8IZF5 1079 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 PLD6Q8N2A8 252 aaKnown RBP11.18□□□□□ -0.62
PFDN1-201ENST00000261813 FBXO15Q8NCQ5 510 aaPredicted RBP11.18□□□□□ -0.62
PFDN1-201ENST00000261813 RCBTB1Q8NDN9 531 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 RAD51AP1Q96B01 352 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 TMEM74Q96NL1 305 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 GPR78Q96P69 363 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 PAIP2Q9BPZ3 127 aaKnown RBP11.18□□□□□ -0.62
PFDN1-201ENST00000261813 CAPS2Q9BXY5 557 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 TMEM216Q9P0N5 145 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
PFDN1-201ENST00000261813 AGRPO00253 132 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 KIF1CO43896 1103 aaKnown RBP11.17□□□□□ -0.62
PFDN1-201ENST00000261813 KERAO60938 352 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SMIM24O75264 130 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SNUPNO95149 360 aaKnown RBP11.17□□□□□ -0.62
PFDN1-201ENST00000261813 CHRM5P08912 532 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-201ENST00000261813 HIST1H2AGP0C0S8 130 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-201ENST00000261813 MYL2P10916 166 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 TFEBP19484 476 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 HIST1H2ADP20671 130 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 GRK2P25098 689 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SERPINB4P48594 390 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 IRF9Q00978 393 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SP140Q13342 867 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 TRA2AQ13595 282 aaKnown RBP eCLIP11.17□□□□□ -0.62
PFDN1-201ENST00000261813 C16orf72Q14CZ0 275 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 CDKL4Q5MAI5 379 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SNAP47Q5SQN1 464 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 PHF19Q5T6S3 580 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 ATG16L1Q676U5 607 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 ZYG11AQ6WRX3 759 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 FAM92BQ6ZTR7 304 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 ARHGAP22Q7Z5H3 698 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 NUDCD3Q8IVD9 361 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 LINC01555Q8NAE3 123 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 FLVCR1-AS1Q8TAF5 88 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 MAGEC3Q8TD91 643 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 LIN37Q96GY3 246 aaPredicted RBP11.17□□□□□ -0.62
PFDN1-201ENST00000261813 HIST1H2AHQ96KK5 128 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 MAGEB18Q96M61 343 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 PPM1MQ96MI6 270 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 PKP4Q99569 1192 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 HIST1H2AJQ99878 128 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 H2AFJQ9BTM1 129 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 CCDC134Q9H6E4 229 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SPHK1Q9NYA1 384 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 ACTR10Q9NZ32 417 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 OR6C2Q9NZP2 312 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SPATA7Q9P0W8 599 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 COPG2Q9UBF2 871 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 IGF2RP11717 2491 aa11.17□□□□□ -0.62
PFDN1-201ENST00000261813 GSAPA4D1B5 854 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 PMS2P1A4D2B8 440 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 A8MU76 341 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 CDC7O00311 574 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 ZBTB14O43829 449 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 KDM1AO60341 852 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 LILRA1O75019 489 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 S100BP04271 92 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-201ENST00000261813 BPGMP07738 259 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 ERGP11308 486 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 ATP5F1P24539 256 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-201ENST00000261813 GLRBP48167 497 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 DLG1Q12959 904 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 PRKAA1Q13131 559 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 FASTKQ14296 549 aaKnown RBP11.16□□□□□ -0.62
PFDN1-201ENST00000261813 PDK4Q16654 411 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 PHKG1Q16816 387 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 TECRLQ5HYJ1 363 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 ARMC6Q6NXE6 501 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 C16orf46Q6P387 395 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 SBSNQ6UWP8 590 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 RGS9BPQ6ZS82 235 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 FRA10AC1Q70Z53 315 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 PRSS42Q7Z5A4 293 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 GPSM1Q86YR5 675 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 SPATA6LQ8N4H0 392 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 C2orf73Q8N5S3 287 aaPredicted RBP11.16□□□□□ -0.62
PFDN1-201ENST00000261813 OR9A1PQ8NGU1 263 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 OR2L8Q8NGY9 312 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 PPP1R14CQ8TAE6 165 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
PFDN1-201ENST00000261813 GRAMD1AQ96CP6 724 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms