RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 AKR1A1P14550 325 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 MC4RP32245 332 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TRMT10BQ6PF06 316 aaKnown RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 CARM1Q86X55 608 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC30A8Q8IWU4 369 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 OR5T3Q8NGG3 340 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 NXPE2Q96DL1 559 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 MED30Q96HR3 178 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 MCCC1Q96RQ3 725 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 FUNDC2Q9BWH2 189 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMEM134Q9H6X4 195 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TNFRSF10DQ9UBN6 386 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 GMDSO60547 372 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 GSTM3P21266 225 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 CXCR3P49682 368 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 DEFB115Q30KQ5 88 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 KIAA1161Q6NSJ0 714 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 EPGNQ6UW88 154 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 FOXRED2Q8IWF2 684 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 DCBLD1Q8N8Z6 715 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TBC1D15Q8TC07 691 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 IRGQQ8WZA9 623 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 NCSTNQ92542 709 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 NKD1Q969G9 470 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 C7orf34Q96L11 122 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 CAMK1GQ96NX5 476 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZIM2Q9NZV7 527 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ANKMY1Q9P2S6 941 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMEM59LQ9UK28 342 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 POMCP01189 267 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 CHRNB1P11230 501 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 MYCLP1P12525 358 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TAS2R39P59534 338 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 SEC23BQ15437 767 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 KLHL26Q53HC5 615 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 HES5Q5TA89 166 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 MSANTD2Q6P1R3 559 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC27A1Q6PCB7 646 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZNF675Q8TD23 568 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 PEX13Q92968 403 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC7A6OSQ96CW6 309 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 NANSQ9NR45 359 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 CFAP97Q9P2B7 532 aa12.86□□□□□ -0.35
PCDHGA3-201ENST00000253812 TVP23AA6NH52 213 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 UBXN7O94888 489 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 CSN2P05814 226 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 ELK4P28324 431 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 STXBP1P61764 594 aaKnown RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 PPP1R8Q12972 351 aaKnown RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMEM86AQ8N2M4 240 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 BRD9Q9H8M2 597 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 BPIFA1Q9NP55 256 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 FANCFQ9NPI8 374 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 SH2B3Q9UQQ2 575 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 B3GNT3Q9Y2A9 372 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 RIPK3Q9Y572 518 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 OIP5O43482 229 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 TSPAN1O60635 241 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 H2AFB2P0C5Z0 115 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 SSR2P43308 183 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 LUMP51884 338 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 MC1RQ01726 317 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 FGL1Q08830 312 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 CAND1Q86VP6 1230 aaKnown RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 TUBG2Q9NRH3 451 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 MARCH2Q9P0N8 246 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 CREBL2O60519 120 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 BMXP51813 675 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 UGT2A3Q6UWM9 527 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 CERS6Q6ZMG9 384 aa12.85□□□□□ -0.35
PCDHGA3-201ENST00000253812 ZC3HC1Q86WB0 502 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms