RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C2orf73Q8N5S3 287 aaPredicted RBP13.59□□□□□ -0.23
VPS25-201ENST00000253794 PTGR2Q8N8N7 351 aaPredicted RBP13.59□□□□□ -0.23
VPS25-201ENST00000253794 ABHD11Q8NFV4 315 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 EXT2Q93063 718 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 ZUFSPQ96AP4 578 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 PYCR2Q96C36 320 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 L3HYPDHQ96EM0 354 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 MED8Q96G25 268 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 LIN37Q96GY3 246 aaPredicted RBP13.59□□□□□ -0.23
VPS25-201ENST00000253794 CCDC74BQ96LY2 380 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 FAM111AQ96PZ2 611 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 CAPS2Q9BXY5 557 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 ENAMQ9NRM1 1142 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 SLC17A7Q9P2U7 560 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 TAC3Q9UHF0 121 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 CLCA2Q9UQC9 943 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 ASB1Q9Y576 335 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 IGHV5-51A0A0C4DH38 117 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 IGKV1-8A0A0C4DH67 115 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 OR2A25A4D2G3 310 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 KIF1CO43896 1103 aaKnown RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 ZBTB11O95625 1053 aaPredicted RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 MYL2P10916 166 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 CPA3P15088 417 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 NELFEP18615 380 aaKnown RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 EPORP19235 508 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 CDH3P22223 829 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 GRIA3P42263 894 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 GDF5P43026 501 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 PIK3CGP48736 1102 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 HSPA7P48741 367 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 AGTR2P50052 363 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 CDC16Q13042 620 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 MPP2Q14168 576 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 PCLAFQ15004 111 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 SF1Q15637 639 aaKnown RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 C18orf21Q32NC0 220 aaPredicted RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 CACHD1Q5VU97 1274 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 KIAA1614Q5VZ46 1190 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 ZNF425Q6IV72 752 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 FAM92BQ6ZTR7 304 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 B3GNT8Q7Z7M8 397 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 GALNT15Q8N3T1 639 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 D2HGDHQ8N465 521 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 GOLGA6L1Q8N7Z2 621 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 C19orf47Q8N9M1 422 aaKnown RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 ARMC2Q8NEN0 867 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 WDR34Q96EX3 536 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 SARGQ9BW04 601 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 C12orf65Q9H3J6 166 aaKnown RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 EHD1Q9H4M9 534 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 SYNDIG1Q9H7V2 258 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 SLC6A20Q9NP91 592 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 MRPS30Q9NP92 439 aaKnown RBP13.58□□□□□ -0.24
VPS25-201ENST00000253794 OXSMQ9NWU1 459 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 OPTCQ9UBM4 332 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 SLC22A14Q9Y267 594 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 CACNA1AO00555 2505 aa13.58□□□□□ -0.24
VPS25-201ENST00000253794 E2F3O00716 465 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 CSO75390 466 aaKnown RBP13.57□□□□□ -0.24
VPS25-201ENST00000253794 WDR47O94967 919 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ST6GAL1P15907 406 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 IMPDH1P20839 514 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 MAGP20916 626 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 CASP2P42575 452 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ID4P47928 161 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 HERVK_113P63132 956 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 EIF3IQ13347 325 aaKnown RBP13.57□□□□□ -0.24
VPS25-201ENST00000253794 PDK4Q16654 411 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 CCDC157Q569K6 752 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ZNF678Q5SXM1 525 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 TRIM73Q86UV7 250 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 PAQR7Q86WK9 346 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 C17orf64Q86WR6 236 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ZNF483Q8TF39 744 aaPredicted RBP13.57□□□□□ -0.24
VPS25-201ENST00000253794 SLC5A11Q8WWX8 675 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 NEIL2Q969S2 332 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ZBTB9Q96C00 473 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 PHF21BQ96EK2 531 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 TCTN2Q96GX1 697 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 PPM1MQ96MI6 270 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 PLCD4Q9BRC7 762 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ACAT2Q9BWD1 397 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ERVK-6Q9BXR3 956 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 PELI2Q9HAT8 420 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 TMEM184CQ9NVA4 438 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 SIDT1Q9NXL6 827 aaKnown RBP13.57□□□□□ -0.24
VPS25-201ENST00000253794 PCTPQ9UKL6 214 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 SNX7Q9UNH6 387 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 WASF3Q9UPY6 502 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 SH2B3Q9UQQ2 575 aa13.57□□□□□ -0.24
VPS25-201ENST00000253794 ANKRD12Q6UB98 2062 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms